Pseudomonas izuensis: LAB08_R41580
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Entry
LAB08_R41580 CDS
T08555
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00300
Lysine biosynthesis
piz00470
D-Amino acid metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01120
Microbial metabolism in diverse environments
piz01230
Biosynthesis of amino acids
Module
piz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LAB08_R41580
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LAB08_R41580
Enzymes [BR:
piz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LAB08_R41580
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BCX69511
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Position
complement(4718678..4719670)
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AA seq
330 aa
AA seq
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MARMYDARGNIYKVVAPEALRRQGIALPDQAGDAAQTRETWTLAAIEACCSWAPGTRPPG
SKDHCSDGLLVGPFQSAPPFDLLIVNTDGTLAERSGNGLTIFSQALSDQGLLPKDETCVL
RVHHDKADVVSPGETSVKAAQVEGVNGFWLDLGKPSFGPQAVSAHGVESVLFRGRELSHV
QPLSSLNAAWSRSQFARVGNPHCVTLVENADALPGNEQMRESPLAEGLTRITYAMPAGAG
RPCPAGINLQWAMHESGQRVVARVFERGEGPTASSGTSATAVACAAWRVGWVSAGEVKVV
MPGGTAPILLEEEQGELSRVSLFGTARLIG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggatgtacgatgcacgaggcaatatctacaaagttgtggcgcccgaggcattg
cgccgccagggtatcgccttgcccgatcaggccggcgacgctgcacaaacccgcgaaacc
tggacgttggcggccatcgaggcgtgctgctcctgggcgcccggcacgcgaccgcccggc
agcaaggatcattgcagcgatgggttgctggtggggcccttccagtcggcgccgcccttc
gatctgttgatcgtgaacaccgacggtaccctggccgagcgcagcggcaacgggctgacg
attttctctcaggcgctcagcgaccagggacttttgccgaaggacgagacctgtgtgctc
agggtgcaccacgacaaggccgatgtggtttcaccgggtgaaacatcggtgaaagcggcg
caagttgaaggtgtgaacgggttctggctggacctgggcaagccttcgttcgggccgcaa
gcggtcagtgcccatggcgttgaaagcgtgctgttccgcggtcgcgaactcagccatgtc
caaccgttgtcgtcgttgaatgccgcctggtcgcgcagccagtttgcgcgggtgggcaat
ccgcattgcgtgacgctggtggaaaacgcggatgccttgccgggcaatgaacagatgcgc
gaatcgccattagcggaaggtttgacgcggatcacctatgccatgccagcgggggcaggg
cggccgtgtccggcggggatcaacctgcaatgggcgatgcacgagtccgggcagcgggtg
gtcgcgcgggtgttcgagcggggcgaagggccaaccgcctcatcggggaccagtgccacg
gcggtggcgtgtgcggcatggcgggtgggttgggtgagcgccggggaagtgaaggtggtg
atgccgggtgggacggcgccgattttgctcgaagaagagcaaggggaattgagtcgggtg
agcctgtttggtacggctcgattgattggctaa
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