Pseudomonas izuensis: LAB08_R42780
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Entry
LAB08_R42780 CDS
T08555
Name
(GenBank) response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
piz
Pseudomonas izuensis
Pathway
piz02020
Two-component system
piz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LAB08_R42780
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LAB08_R42780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
piz02022
]
LAB08_R42780
Two-component system [BR:
piz02022
]
OmpR family
QseC-QseB (quorum sensing)
LAB08_R42780
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
BCX69626
LinkDB
All DBs
Position
complement(4856336..4857016)
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AA seq
226 aa
AA seq
DB search
MHVLVCEDDELIASGIVAGLTAQGLTVEHVATASAARAMLKVAEFDVMVLDLGLPDEDGL
KLLQQLRHNGLELPVLILTARDSVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVA
GRSVNLIEHGALTYDPSSRETTLAGQPVDLSRREQSLLQALLHNRGRVLSTEQLKDSVYG
FNDELESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPADGGEQSK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtactggtttgcgaagacgatgagttgatcgccagcggcatcgtcgccggcctg
accgcccagggcctgaccgtggagcacgtggccacggcgtccgcggcacgggcgatgctc
aaggtggcggagttcgacgtgatggtgctcgatctcggcttgcccgacgaggatggcctg
aagctgctgcagcagttgcgccacaacggtctggaactgccggtgctgatcctcacggcc
cgggactcggtcaccgaccgtgtcgacggtttgcaggccggcgccgatgactacctgctc
aaacctttcgacctgcgcgaattggccgcgcgcctgcacaccctgttgcgacgggtggcg
gggcgcagcgtcaacctgatcgaacacggtgccttgacttacgacccgagcagtcgcgaa
accacgctggccggccagccggtggatctctcgcgccgcgagcaatcgttgttgcaggcc
ctgctgcacaaccgtggtcgcgtgctgtccaccgagcaactcaaggacagcgtctatggc
ttcaacgacgagcttgagagcaacgccctcaacgtccatatccatcacctgcggcgcaaa
ctcggcaatggtatcgtcgagacggtgcgcggcctggggtatcgcctggggccggccgat
ggtggagaacaatcgaagtga
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