Pseudomonas izuensis: LAB08_R43280
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Entry
LAB08_R43280 CDS
T08555
Name
(GenBank) response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
piz
Pseudomonas izuensis
Pathway
piz02020
Two-component system
piz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LAB08_R43280
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LAB08_R43280
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
piz01001
]
LAB08_R43280
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
piz02022
]
LAB08_R43280
Enzymes [BR:
piz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LAB08_R43280
Protein kinases [BR:
piz01001
]
Histidine kinases
Other
LAB08_R43280
Two-component system [BR:
piz02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
LAB08_R43280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_2
IFT57
PDE8A_N
GpP_4th
Motif
Other DBs
NCBI-ProteinID:
BCX69676
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Position
4909165..4911501
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AA seq
778 aa
AA seq
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MIQHPMDIKFTNRLSYKQARLTVLVGFILGTLLSLLQIGIDYASEDASINREILSLLEIS
HNPASRIAYNIDAELAQELTLGLLRSPAIIGARLTDNNGNVLANVKRPGLQSGYRVLSDL
LFGADRQFEDRLYLDHLPGEALGTLQLDVDTYSFGYRFLRRAEVTLLNGFARSLILTGLL
LALFYVMLTKPLVRVIRELSGRDSRSIEPTSLECPTGHANDEIGVLVKVANQQFENVATE
IQQRRNAENRLTDYLSQLENIVSARTAELKAINTRLSQSNEELEVARSTALDMAEARSVF
LANMSHEIRTPLNGLLGMIALSLDGPLTAEQQQQLSIAHDSGKVLVELLNDILDLSKFDA
GQLELEHIPFDLASLIEDTANLLSQNAAPSVELTCLIDPQFPALVLGDPTRVRQIVSNLL
SNALKFTRFGRVDVRLSTAGDGVRIEVCDTGIGIPQDAQVKIFQPFTQAGAGITRQFGGT
GLGLALTYNLCEAMQGRLTISSEAGFGSQFCAQLPLPRHTRALVPPSLKGKVIAITAASS
GLAELLGSVLPGWGVDYQQRAIDDPLIGLDFDMLITDCPECLFNLRPTFTAPILLVTAYG
NFMPSEQVNALAPLQQQARPLARNALHQNLRRVLQPEIATIGDIRIDAQSPQRRARVLLV
EDNPVNQLVAKGMLGKLGCEVIVAAHGVEALDQLEGSEFDLVLMDCNMPVMDGYEASRQI
RRSGRWPQLPIVALTANAMSEERERCRAAGMSDYLAKPFRREELVALLDIWIPVTTVP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtgatccaacaccccatggatatcaagttcaccaaccggctgtcttacaaacaagcccgg
ctgaccgtgctggtcggttttattctgggcacgctgctcagcctgctgcaaataggcatc
gattatgccagtgaagacgcctccatcaaccgtgaaatcctgtctttgctggaaatcagc
cacaaccctgcctcgcgcatcgcctacaacatcgacgccgaactcgctcaggaactgacc
ctgggcctgctgcgctcgccggcgatcatcggcgccaggctgaccgacaacaacggcaac
gtgctggccaacgtcaagcgccccggcctgcaaagcggctatcgcgtgctcagcgatctg
ctgttcggcgccgaccggcagttcgaggaccgcctctatctggaccacttgccaggcgaa
gccctcggcacgctgcaactggacgtcgacacctactcattcggatatcggttcctgcgt
cgcgccgaagtgaccctgctcaacggtttcgcccgcagcctgatcctgaccggcctgctg
ctggcgctgttctatgtgatgctgaccaaacccttggtgcgggtgatccgtgaactcagc
ggccgcgattcgcgcagcattgaacccacctccctggaatgcccgaccgggcacgccaat
gacgaaatcggcgtgctggtgaaagtcgccaaccagcaattcgaaaatgtcgccaccgaa
atccagcagcggcgcaacgcggaaaaccgcctcaccgactacctcagccaactggaaaac
atcgtgtcggcgcgcaccgccgaactcaaggcgatcaacacccgcctgagccaatccaat
gaagagctggaagtcgcccgcagtactgccctggacatggccgaagcgcgttcggtattc
ctggccaacatgagtcacgaaatccgcacgcccctcaatggcttgctgggaatgattgcg
ctgtcgcttgacggtccgctgactgccgagcaacagcaacagctgtccattgcccatgac
tcgggcaaggtgctggtggaattgctcaacgatattctggatctgtcgaaattcgatgcc
ggccagcttgaactcgaacacatcccgttcgacctggcctcgctgatcgaagacaccgcc
aacttgctgtcgcaaaacgcggcaccgagtgtcgagctgacctgcctgatcgatccgcaa
tttccggcactggtactcggcgatccgacccgggtccggcagatcgtcagcaacctgctt
tcaaacgccctcaagttcacccgtttcgggcgagtcgatgtgcgcctgtcgaccgccggc
gatggcgtcagaatcgaggtctgcgacacgggcatcggcatcccccaggacgctcaggtg
aaaatcttccagccctttacccaggccggtgccggaattacccggcaattcggcggtacc
ggattgggcctggcgctgacctacaacctttgcgaagccatgcaagggcgcctcaccatc
agctcggaagcgggtttcggcagccaattctgcgcgcaactgccactgccccggcacacc
cgggccctcgtaccgccgtctttgaagggcaaggtcatcgccattaccgccgccagcagt
ggcctggcggaactgctgggtagcgtgttacctggctggggagtggactatcagcagcgc
gccatcgacgacccgttgatcggcctggatttcgacatgctgattaccgattgcccggaa
tgcttgtttaacctgcgccccaccttcaccgcgccgattttgctggtgaccgcttatggc
aatttcatgcccagcgaacaagtcaacgccctcgcccccttgcagcagcaggcacgcccc
ttggcacgcaatgcgctgcaccagaacctgcgccgcgtcctgcaacctgaaatcgccacc
attggcgacatccggatcgatgcgcaatccccacaacgccgcgcgcgggtgctgctggtc
gaggacaatccggtcaatcaactggtggccaagggcatgctcggcaaactcgggtgcgaa
gtgatcgtcgccgcccatggtgtcgaggcactggatcagttggaaggcagcgagttcgat
ctggtgttgatggactgcaacatgccggtgatggacggctatgaagcgagccggcaaatc
cgccgcagcggacgctggccgcaattgcctatcgtcgccctgaccgccaacgccatgtcc
gaggaacgcgaacgttgccgtgcggcgggcatgagcgactacctggccaaaccgttccgc
cgggaagagttggtcgcgctgctggatatctggatacccgttacgacagtgccttga
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