Pseudomonas izuensis: LAB08_R43620
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Entry
LAB08_R43620 CDS
T08555
Name
(GenBank) L,D-transpeptidase family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
piz01002
]
LAB08_R43620
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
piz01011
]
LAB08_R43620
Peptidases and inhibitors [BR:
piz01002
]
Cysteine peptidases
Family C82
LAB08_R43620
Peptidoglycan biosynthesis and degradation proteins [BR:
piz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LAB08_R43620
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
BCX69710
UniProt:
A0ABM7RV86
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All DBs
Position
complement(4940852..4941823)
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AA seq
323 aa
AA seq
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MLPRFPAVTRCLSLAALCVAGPVAALEFPLPPPGEDIIGQVQVIKAKYEDTFADLGTAYD
LGYSEMVAANPGVDAWLPGAGTEIVLPTRFILPPGPREGIVINLAEYRLYYYPKGKNVVY
TFPLGIGREGWGSPIAHTSITAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGP
FKFTLGTPGYLIHGSNKKFGIGMRTSHGCFRMFNNNVLEMAGMVPVGTSVRIINDPYKFG
VSGGKVYLEAHTPLDDKGNPSVVDKHTAVINAMLKREDITNNLRMNWDVVRDVVAAEDGL
PVEIAVPNNSAPMVTSAPIDPLQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgcgctttcctgccgtcacccgctgcctgtctcttgccgccctgtgtgtggcc
ggtcccgttgctgcattggagtttcccctgcctccgcccggtgaagacatcatcggccag
gtgcaggtgatcaaggccaagtacgaagatactttcgccgacctgggcaccgcctacgat
cttggctactcggaaatggttgcggccaacccgggcgtcgatgcctggttgccgggcgcc
ggcaccgaaatcgtgttgccgacccgcttcatcctgccgccgggcccgcgtgaaggcatc
gtcatcaacctcgccgagtaccgcctctactactacccgaaaggcaagaatgtggtgtac
accttcccgctgggtatcggccgtgaaggttgggggtcgccgattgcccacaccagcatc
actgccaagacgccgaacccgacctggacgcctccagcgtcgatcaaggccgagcacgcc
gccgatggtgatccgctgccaaacgtagtaccggcaggcccggataacccgctggggccg
ttcaagttcaccctgggcaccccgggctacctgatccatggttcgaacaagaagttcggc
atcggcatgcgcaccagccacggctgcttccgcatgttcaacaacaacgtgctggaaatg
gccggcatggtgccggtgggtacgtcggttcgtatcatcaatgacccgtacaagttcggg
gtgagtggcggcaaggtctacctggaggcgcacacgccactggacgacaagggcaacccg
tcggtggtcgacaagcacaccgcggtgatcaacgcgatgctcaagcgtgaagacatcacc
aacaacttgcgcatgaactgggatgtggtacgtgacgtcgttgctgccgaagacggcttg
ccggtggaaatcgccgtgccgaacaactcggcgccgatggtcacgagtgcaccgatcgac
ccgctgcagtaa
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