Pseudomonas izuensis: LAB08_R45120
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Entry
LAB08_R45120 CDS
T08555
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00010
Glycolysis / Gluconeogenesis
piz00020
Citrate cycle (TCA cycle)
piz00260
Glycine, serine and threonine metabolism
piz00280
Valine, leucine and isoleucine degradation
piz00310
Lysine degradation
piz00380
Tryptophan metabolism
piz00620
Pyruvate metabolism
piz00630
Glyoxylate and dicarboxylate metabolism
piz00640
Propanoate metabolism
piz00670
One carbon pool by folate
piz00785
Lipoic acid metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01120
Microbial metabolism in diverse environments
piz01200
Carbon metabolism
piz01210
2-Oxocarboxylic acid metabolism
piz01240
Biosynthesis of cofactors
Module
piz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
piz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
piz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
piz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
piz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LAB08_R45120 (lpdA)
00020 Citrate cycle (TCA cycle)
LAB08_R45120 (lpdA)
00620 Pyruvate metabolism
LAB08_R45120 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LAB08_R45120 (lpdA)
00640 Propanoate metabolism
LAB08_R45120 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LAB08_R45120 (lpdA)
00280 Valine, leucine and isoleucine degradation
LAB08_R45120 (lpdA)
00310 Lysine degradation
LAB08_R45120 (lpdA)
00380 Tryptophan metabolism
LAB08_R45120 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LAB08_R45120 (lpdA)
00670 One carbon pool by folate
LAB08_R45120 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
piz04147
]
LAB08_R45120 (lpdA)
Enzymes [BR:
piz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LAB08_R45120 (lpdA)
Exosome [BR:
piz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LAB08_R45120 (lpdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
FAD_binding_3
NAD_binding_8
Thi4
DAO
3HCDH_N
AlaDh_PNT_C
2-Hacid_dh_C
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
BCX69855
LinkDB
All DBs
Position
complement(5094057..5095493)
Genome browser
AA seq
478 aa
AA seq
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MSQKFDVVVIGAGPGGYVAAIKAAQLGLSTACIEKYTDAEGKQALGGTCLNVGCIPSKAL
LDSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQG
HGKLLAGKKVEVTKPDGSVEVIEAENVILAPGSRPIDIPPAPVDQKVIVDSTGALEFQTV
PKRLGVIGAGVIGLELGSVWSRLGSEVVVLEALDTFLMAADTAVSKEALKTLTKQGLDIK
LGARVTGSKVNGDEVVVNYTDANGEQTITFDKLIVAVGRRPVTTDLLAADSGVTLDERGF
VHVDDHCATTVPGVFAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaaatttgacgtagtagtgatcggtgcgggccctggcggctacgtggctgcc
atcaaggccgcgcaactcggtctgagcactgcctgcatcgagaagtacaccgatgctgaa
ggcaagcaagccctgggcggcacctgcctgaacgtaggctgcattccatccaaggcgctg
ctggacagctcctggaaatacaaggaagcgaaagagagcttcaacgtccacggcatttcg
actggcgaagtcaaaatggacgtcgctgcgatggttggccgcaaggctggcatcgtcaag
aacctgaccggcggtgttgccaccctgttcaaggccaacggcgtcacttcgatccagggc
cacggcaaactgctggccggcaagaaagtcgaagtcaccaagccagacggttcggttgaa
gtcatcgaagctgaaaacgtcatcctggctccaggttcgcgtccgatcgacattccaccg
gctccggttgatcagaaagtcatcgttgattcgactggcgcactggaattccaaaccgta
cctaaacgtctgggcgtaatcggtgctggcgtgatcggtctggaactgggttcggtatgg
tcgcgtctgggctctgaagtggttgtcctggaagccctggacactttcctgatggcagcg
gacaccgctgtttccaaggaagcgctgaaaaccctgaccaaacagggtctggacatcaag
ctgggcgctcgcgtgaccggttccaaagtgaacggcgacgaagtcgttgtgaactacacc
gacgccaacggcgaacagaccattactttcgacaagctgatcgtagccgttggtcgccgt
ccggtgaccactgatctgctggctgccgacagcggcgtgaccctggacgagcgcggtttc
gtgcacgttgacgatcactgcgccaccaccgtaccgggcgttttcgccatcggtgacgtg
gttcgcggcatgatgctggcgcacaaggcgtcggaagaaggcatcatggttgtcgagcgc
atcaagggccacaaggcccagatgaactatgacctgatcccttcggttatttatactcac
ccggaaatcgcgtgggtcggtaaaaccgagcaggccttgaaagctgaaggcgtagaagtt
aacgtcggcaccttcccgttcgcagcctctggccgtgccatggctgccaacgataccggc
ggtttcgtcaaggtcatcgcagatgccaagacagaccgcgtattgggcgtccacgtgatt
ggcccaagcgctgccgaactggttcagcagggcgcaatcggtatggaattcggcaccagc
gctgaagacctgggcatgatggttttctcccatccgaccctgtctgaagccttgcacgaa
gctgctttggcagtgaatggcggcgccatccacatcgccaaccgcaagaagcgttga
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