Pseudomonas izuensis: LAB08_R45160
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Entry
LAB08_R45160 CDS
T08555
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00020
Citrate cycle (TCA cycle)
piz00190
Oxidative phosphorylation
piz00650
Butanoate metabolism
piz00720
Other carbon fixation pathways
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01120
Microbial metabolism in diverse environments
piz01200
Carbon metabolism
Module
piz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
piz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
piz_M00149
Succinate dehydrogenase, prokaryotes
piz_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LAB08_R45160
00650 Butanoate metabolism
LAB08_R45160
09102 Energy metabolism
00190 Oxidative phosphorylation
LAB08_R45160
00720 Other carbon fixation pathways
LAB08_R45160
Enzymes [BR:
piz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LAB08_R45160
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
BCX69859
UniProt:
A0ABM7RXX9
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All DBs
Position
complement(5100664..5102436)
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AA seq
590 aa
AA seq
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MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNGQGEF
VGVIAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITQDADGVDTIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTDGIDYDDATEADIEAALARLNALNSRTDGEDVASLRRELQNCMQNYFGVFRTGE
YMQKGIAQLADLRKRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLFFPGEKRVAKRAVNFSPKTVPTFEPKIRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaacgatttctttcgacgccatcattattggtggcggcggcgccggc
atgcgcgctgcgctgcaactggcgcaaggcggccacaagactgccgtgatcaccaaggtg
ttcccgacccgttcgcacactgtgtcggcacagggcggcatcacctgcgccatcgcgtcg
gccgacccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactat
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggccgctgttttcgag
ctcgaccacatgggtctgccgttctcgcgtaccgaaaccggccgtatctaccagcgtccg
ttcggcggtcagtcgaaggactacggtaaaggcgggcaggctgcccgtacttgcgccgct
tccgaccgtaccggtcacgcgctgctgcacacgctttatcagggcaacctgaaagccggc
accacgttcctgaacgagtactacgctgtcgacctggtgaaaaacgggcaaggcgagttc
gtcggtgtgatcgcgatctgcatcgaaaccggcgaaaccacctacatccgcgccaaggca
accgttctggcaaccggcggtgcaggtcgtatctacgcttcgaccaccaacgccctgatc
aacaccggtgacggcgtcggcatggctctgcgtgcaggcgtaccggtacaagacatcgaa
atgtggcagttccacccgaccgggatcgccggtgccggtgtactggtaactgaaggttgc
cgtggtgaaggtggatacctgatcaacaagcacggcgagcgtttcatggagcgttatgct
ccgaacgcgaaagacctggccggtcgtgacgttgttgcccgttcgatggttaaagagatc
atcgccggcaacggttgcggtccgaacggcgaccacgtaatgctcaagctcgaccacctg
ggcgaggaagtgctgcacagccgtctgccaggtatctgcgaactgtcgaaaacgtttgct
cacgttgacccggttgttgctccggttccggttgttccgacctgccactatatgatgggc
ggcgttgccaccaacatccatggccaggcgatcactcaggacgccgacggcgtcgacacc
atcatccctggcctgttcgcagtgggtgaagtggcgtgcgtatcggttcacggtgccaac
cgtctgggcggcaactcgttgctcgacctggtggtcttcggtcgtgcggccggtctgcac
ctggaaaaagcgctgaccgacggtatcgactacgacgacgccaccgaagctgatatcgaa
gctgctctggcgcgcctcaacgcactgaacagccgtaccgatggcgaagacgtcgcttcc
ctgcgtcgcgagctgcaaaactgcatgcagaactacttcggtgtattccgtaccggcgaa
tacatgcagaagggtattgcccagttggccgatctgcgcaagcgcatcgccaacgtcaag
atcaacgacaagtcgcaggcgttcaacactgcgcgtatcgaggctcttgagctgcaaaac
ctgctggaagtggctgaagctaccgccatcgctgccgaagtacgtaaagagtcccgcggt
gctcacgcccgtgaagacttcgaagaccgtgacgacgaaaactggctgtgccacaccctg
ttcttcccgggtgagaagcgcgttgccaagcgtgccgtgaacttctcgccgaagacagtt
ccgacgtttgaacccaagattcggacttactaa
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