Pseudomonas izuensis: LAB08_R46070
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Entry
LAB08_R46070 CDS
T08555
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
piz
Pseudomonas izuensis
Pathway
piz02020
Two-component system
piz02025
Biofilm formation - Pseudomonas aeruginosa
piz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LAB08_R46070
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LAB08_R46070
09142 Cell motility
02040 Flagellar assembly
LAB08_R46070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
piz03000
]
LAB08_R46070
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
piz02035
]
LAB08_R46070
Transcription factors [BR:
piz03000
]
Prokaryotic type
Helix-turn-helix
Other families
LAB08_R46070
Bacterial motility proteins [BR:
piz02035
]
Flagellar system
Flagellar assembly proteins
Others
LAB08_R46070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
FleQ
HTH_50
AAA_7
nSTAND3
bpMoxR
AAA_22
AAA
GAAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BCX69950
LinkDB
All DBs
Position
complement(5187031..5188254)
Genome browser
AA seq
407 aa
AA seq
DB search
MGDNSSIDLPEDQRRRVLSTLEMPPSYSKLLDSLHRAQVYREMYDQARERGRHREPNLFR
SLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGKEVVARNLHYHSKRREAPFVPVNCG
AIPAELLESELFGHEKGAFTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQE
RTFERVGSNKTQSVDVRIIAATHKNLESMIEIGTFREDLYYRLNVFPIEMAPLRERVEDI
PLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPGNVRELANLVERMAIMHPYGVIGVV
ELPKKFRYVDDEDEQMVDSLRSDLEERVAINGHTPDFTANAMLPPEGLDLKDYLGGLEQG
LIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGMSRRDGDEQADD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataattcttccattgacctgccggaggaccagcgtcgccgggtgctttcgacc
ctcgaaatgccacccagctacagcaagttgctcgactcgctgcaccgcgcccaggtctac
cgcgagatgtatgaccaggcccgcgagcgcggtcgtcatcgcgaacccaatcttttccgc
agcctcgtcggcaccagccgggcgatccagcacgtccgccagatgatgcagcaagtcgcc
gataccgatgccagcgtgttgatcctgggcgagtccgggaccggcaaggaagtggtcgcg
cgcaacctgcattaccattccaagcgtcgtgaggcaccgttcgtgccggtcaattgcggg
gcgattccggccgagctgctggaaagcgaattgttcggtcacgagaagggcgccttcacc
ggagcgatcaccagccgtgccgggcgtttcgagctggccaacggcggtaccctgttcctc
gatgaaatcggcgacatgccgctgccgatgcaggtcaagttgctgcgcgtgttgcaggag
cgcaccttcgaacgcgtgggcagcaacaagacccaaagcgtcgatgtacgcatcattgcg
gcgacccacaagaatctcgaaagcatgatcgagatcggcacgttccgcgaagacctgtac
taccgcctgaatgtgttcccgatcgagatggcgccgctgcgcgagcgtgtcgaagacatt
ccgttgctgatgaacgagttgatctcgcgcatggagcacgagaagcgtggttcgatccgc
ttcaactccgcagccatcatgtccctgtgccgtcatggctggccgggcaacgtccgcgag
ctggccaacctggtggaacgcatggcgatcatgcatccgtacggggtgatcggcgtggtc
gaactgccgaagaaattccgttacgtcgacgatgaagatgagcaaatggtcgacagcctg
cgcagcgatctcgaagagcgggtggccatcaatggtcataccccggacttcaccgccaat
gccatgctgccgccggaaggcctggacctgaaggactacctcggcggtctggagcagggg
ctgattcagcaggcgctggatgatgccaacggtatcgtggcgcgcgctgccgaacggctg
cgtatccgccgcactacgttggtggaaaagatgcgcaagtacggtatgagccgtcgtgac
ggagatgaacaggcggatgattga
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