KEGG   Pseudomonas izuensis: LAB08_R46630
Entry
LAB08_R46630      CDS       T08555                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
piz  Pseudomonas izuensis
Pathway
piz00061  Fatty acid biosynthesis
piz00071  Fatty acid degradation
piz01100  Metabolic pathways
piz01212  Fatty acid metabolism
piz02024  Quorum sensing
piz04146  Peroxisome
Module
piz_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:piz00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    LAB08_R46630
   00071 Fatty acid degradation
    LAB08_R46630
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    LAB08_R46630
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LAB08_R46630
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:piz01004]
    LAB08_R46630
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:piz04147]
    LAB08_R46630
Enzymes [BR:piz01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     LAB08_R46630
Lipid biosynthesis proteins [BR:piz01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   LAB08_R46630
Exosome [BR:piz04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   LAB08_R46630
  Exosomal proteins of breast cancer cells
   LAB08_R46630
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 AMP-binding_C
Other DBs
NCBI-ProteinID: BCX70006
LinkDB
Position
complement(5248579..5250246)
AA seq 555 aa
MSAAFRLPLEVFYEREARHPRQRFLVQPVGDGQVETLTWADVGYQARCAAHWLRARELPQ
GSHIALISKNCAHWIIADLAIWMAGHVSVPLYPNLTAESVAQVLEHSEAALAFIGKLDDW
PGMSRGVNPDLVTISLPLHPPGDFDFSWADLQHSSPIQDDPKPGADQLATIIYTSGTTGM
PKGVMHSFGNLGFATTHGTQLFGLNESDRLLSYLPLCHVAERMFVELASIYTGQTVFFAE
SLDTFLTDLRRARPTALFGVPRIWTKFQMGVYSKIPAKRLDFLLGLPIIGKRVGHKVLAG
LGLDALRVALSGAAPVPQTLLLWYRKLGLDVLEVYGMTESCGYSHICLPGQNKPGWIGKP
CPEVEVRIDESGEVLVRSGATMLGYFKEPQKTADTLTEDGFLRTGDKGEEDAEGNLRLTG
RLKEIFKTSKGKYVAPAPIENRLAVHSRIEQVCVVGDGLSAPLGLCVLSAVGQQDAGEAA
RAGLRSSLEKLLEEVNAVLDKHERLRRLVVVKDSWAVENGFLTPTLKIKRNVIEAAYGAR
FEEWSEHSEAVLWQD
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgtctgctgcttttcgtttgccgttggaggtgttctacgagcgggaggcgcgtcatccg
cgccagcgctttttggtccagcctgtcggtgacggccaggtcgagaccctgacctgggcc
gacgtcggttatcaggcccgctgcgcggcgcactggctacgggcgcgggaattgccccaa
ggcagtcacatcgccctgatctcgaaaaactgtgcgcactggatcattgccgacctggcg
atctggatggccgggcatgtttcagtgcccttgtacccaaacctgacggccgagtcggtg
gcccaggtgctggagcactccgaagcggcgctggcctttatcggtaagctcgacgactgg
cccggcatgtcccgtggggtcaacccggaccttgtaaccatcagcctgccgctgcatccg
ccgggggacttcgatttcagctgggccgacctgcaacacagctcgccgattcaggacgac
ccgaaacccggcgccgatcaactcgcgaccatcatttatacctccggcaccacgggcatg
cccaaaggggtgatgcacagcttcggcaatctgggattcgccaccactcacggcacgcaa
ttgttcggcttgaatgagtcggatcgactgctttcctatctgccactgtgtcacgttgcc
gagcggatgttcgtcgaactggcgtcgatctataccgggcagaccgtattctttgccgaa
agcctcgataccttcctcaccgacctgcggcgcgcccggccgacggcgttgttcggcgta
ccgcgtatctggaccaaattccagatgggtgtgtacagcaagatcccggcaaaacgcctc
gacttcctgcttggcctgccgatcatcggcaagcgggtcgggcacaaggtgctcgccggg
ctgggcctggacgccttgcgcgtggcgttgtcgggcgccgctcccgtgccgcagaccttg
ctgctgtggtatcgcaaactcgggctggacgtgctggaggtctatggcatgacggaaagc
tgtggctactcgcacatctgtctgcccggccagaacaaacccggctggatcggcaagccc
tgcccggaggtcgaggttcgaatcgatgagtcgggcgaggtgctggtgcgtagcggcgcc
accatgcttgggtatttcaaggaaccgcagaaaaccgccgataccctgaccgaggacggc
ttcctgcgcactggcgacaaaggcgaggaagacgccgaaggcaacctgcgcctgaccgga
cggctgaaggaaatcttcaagaccagcaaaggcaagtacgtggcgccggcacccatcgaa
aaccgcctggcggtgcattcccgcatcgagcaggtgtgcgtggtgggcgatggcttgagt
gcgccgctgggcttgtgcgtgctctcggcggtggggcagcaggatgcaggggaagcggcc
cgcgccggcttgcgctccagcctggaaaaactgctggaagaggtcaatgcggtcctcgat
aagcacgagcgattgcggcggctggtggtggtcaaggacagctgggccgtggaaaacggc
ttcctcacaccgaccctgaagatcaagcgcaacgtgatcgaagccgcctatggcgcgcgc
ttcgaagaatggagcgagcatagcgaagcggtgctgtggcaggattga

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