Pseudomonas izuensis: LAB08_R46690
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Entry
LAB08_R46690 CDS
T08555
Name
(GenBank) response regulator
KO
K20974
two-component system, sensor histidine kinase [EC:
2.7.13.3
]
Organism
piz
Pseudomonas izuensis
Pathway
piz02020
Two-component system
piz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LAB08_R46690
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LAB08_R46690
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
piz01001
]
LAB08_R46690
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
piz02022
]
LAB08_R46690
Enzymes [BR:
piz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LAB08_R46690
Protein kinases [BR:
piz01001
]
Histidine kinases
Other
LAB08_R46690
Two-component system [BR:
piz02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
LAB08_R46690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
HAMP
sCache_4
GRIP
HATPase_c_3
PDE8A_N
DUF6047
Motif
Other DBs
NCBI-ProteinID:
BCX70012
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All DBs
Position
5255540..5257441
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AA seq
633 aa
AA seq
DB search
MTFRRRWDINTRTQLISLGPALLLTLLLISFFTFVRIQDLRQELNHTGQLIANQLAPATE
YGVISGNNEVLESLLKATLATPNVRFLEIQDNDNRILVYVEQPSASHTHPHQVEVFQAPV
RLQRIPLHNDFFQDSKIATSGPAEDYLGRVIVGLSSDAFSQRQQEILFKAAILALFALLF
TFVLARRLAGSLSQPIRDIGNAVKAIQDGDYKTPLPIVDDTELGALSQHINNLASGLEQA
SREQHQAMAQLIQTREEAEKANNAKSDFLAMMSHELRTPMNGVLGMLQLLETTEMTPEQV
EYAALASESTEHLLKVINDILDFSRIERSELELEHIPFNLADLIGSCAQSFQHSAAQRGL
DLQLQIAQDMRELQVQGDPTRIRQILVNLIGNALKFTEQGRVSIEPQWQSLDHELVWFTC
TVRDSGIGIATENLELMFNAFQQADSSISRRYGGTGLGLPIARTLAERMGGTLRAQSEEG
RGSVFTLEIPLALHQQPLQVPAPRAPTGNGDGDGRNVLLVEDNPVNQTVIEAMLRSLGFT
VSVAADGAQAVRSAESLIFEAVLMDCRLPIIDGYEATRQIRQLPGCTDLPIIALTANALQ
GDREACLSAGMNDYLAKPFKRNDLQQILQRWVQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaccttccgtcgccgttgggacatcaacacccgcacgcagttgatcagtctgggccct
gcccttttgctgaccttgctgctgatcagcttctttaccttcgtgcggatccaggacctg
cgccaggaactcaaccacaccggtcaactcatcgccaaccaattggccccggccactgaa
tacggggtgatttccggcaacaacgaggtgctggaaagtctgctcaaggccaccttggca
acgcccaacgtacgttttctggaaatccaggacaatgacaaccggattctggtgtatgtc
gagcaaccgtcggccagccatacccacccgcatcaggtcgaagtgtttcaggcgccggta
cggctgcagcggatcccgctgcacaatgattttttccaggacagcaaaatcgccaccagc
ggccccgccgaggattacctgggccgggtgatcgtcggcctgtccagcgatgccttcagt
caacgccagcaggaaattctattcaaggccgcgattctggcgctgttcgccctgctgttt
accttcgtcctcgcccgacgcctggcgggaagcctgtcgcaaccgatccgcgacatcggc
aatgcggtcaaggcgatccaggacggggactacaaaacgccgttgcccattgtggacgac
accgaactgggcgccttgtcgcaacacatcaataacctggccagcggtctcgaacaggcc
agtcgcgaacagcaccaggccatggcgcaattgatccagacccgtgaagaagcggaaaaa
gccaacaatgccaagtccgacttccttgccatgatgagccatgaactgcgcacaccgatg
aatggcgtgctgggcatgttgcagctgctggaaaccaccgaaatgaccccggagcaggtc
gaatacgcggcgctggcgtcggagtccaccgagcatctgctcaaagtcatcaacgatatt
ctggatttctcgcgcatcgagcgctcggaactggagctcgaacacattccgttcaacctc
gccgacttgatcggcagctgcgcccagtcgttccagcacagcgccgcgcaacgcgggctc
gatctgcaattgcagatcgcgcaagacatgcgcgagttgcaggtccagggtgacccgacg
cggatccggcagattctggtcaacctgatcggtaacgcactgaagttcaccgagcagggc
cgtgtgtctatcgaaccgcagtggcagtcgctggatcatgaactggtgtggttcacctgt
accgtgcgcgacagcgggatcggcattgcgaccgaaaacctggaattgatgttcaacgcg
ttccagcaggccgacagttctatttcaagacgttacggcggcaccggcctgggcctgccg
attgcgcgtactctcgccgagcgcatgggcggcaccctgcgcgcccagagcgaagaaggc
cgtggctcggtattcaccctggaaatcccgctggcacttcatcagcagccactgcaggtt
ccagccccgcgggcaccgacaggcaatggggatggcgatggccgcaatgtgttgctggtc
gaagacaatccggtcaatcagacggtcatcgaagccatgttgcgcagcctgggctttact
gtcagcgtcgccgccgatggcgcacaggcggtgcgcagtgccgagagcctgattttcgaa
gcggttctgatggactgccgattaccgatcatcgatggctacgaggccacccgacagatt
cgccaactgcctggttgcaccgacttgccgatcatcgccctgaccgccaatgccttgcag
ggcgatcgcgaagcctgtttgtcggcggggatgaacgattatctggccaagcccttcaaa
cgcaatgatcttcagcagattctgcagcgctgggtgcagtag
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