Pseudomonas izuensis: LAB08_R48340
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Entry
LAB08_R48340 CDS
T08555
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
piz
Pseudomonas izuensis
Pathway
piz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LAB08_R48340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R48340
Enzymes [BR:
piz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LAB08_R48340
DNA repair and recombination proteins [BR:
piz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LAB08_R48340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
DUF4777
Motif
Other DBs
NCBI-ProteinID:
BCX70168
LinkDB
All DBs
Position
complement(5426220..5427083)
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AA seq
287 aa
AA seq
DB search
MKLLLAYQPPYDWPAMLGFLSARAIAGMEEVVDGVYSRSIGLKGAHGSLSIKPATADSLE
LTLDFPDPAAVPEIVARVRRMFDLDADLPSIHQHLAADPLLARLIAERPGLRVPGAWDGL
ELAIRAVLGQQITVGAAIKLAGKLVAQYGVPMTTPQGGLSHVFPEAEVLAMADLAALGMP
KSRGRTLSGVARALLDDPLLFEPGRQGGVARLLALYGIGDWTAQYIALRQLREMNGFPTG
DVGLINALAALEGQGVTARQLSLRAEGWRPYRGYAAQLLWTSLSRSD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgttgcttgcgtatcaaccaccttacgactggccggcgatgctcggctttttg
tcggcgcgggcaattgccggaatggaagaagtggtcgacggtgtttactcgcgctccatc
ggcttgaaaggtgctcacggcagcctgtcgatcaagcctgcgacagcggactcactggag
ctgacactcgacttccccgacccggcggccgtgcccgagatcgtcgcgcgggtgcgacgg
atgtttgacctggatgccgacctgccctcgattcatcagcatttggcggctgatccgctg
ctggcgcggttgattgccgagcgtccgggactgcgtgtgccgggggcctgggacggactg
gaattggcgattcgtgcggtgttgggccagcagattacggtgggggccgcgatcaaactg
gcggggaaactggtggcgcaatacggcgtgccaatgaccacgccgcagggtggcttgagc
cacgtgtttcctgaggccgaggtcttggcgatggcggatctggcggcattggggatgccg
aaaagccgtggccgcacattgtcgggcgtggcccgggcattgctcgatgatccgttgctg
ttcgaaccgggtcggcagggcggtgtggcgcgcttgctggccttgtacggcataggtgac
tggacggcgcaatacattgccctgcggcagttgcgcgagatgaatgggtttcccacgggg
gatgtggggttgatcaatgccttggcagcgcttgaggggcagggcgtgacagcgcggcag
ttgtcgttgcgggctgaagggtggcggccgtatcgggggtatgcggcgcagttgctttgg
acttcgttgagtcggtcggattga
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