Pseudomonas izuensis: LAB08_R48750
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Entry
LAB08_R48750 CDS
T08555
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R48750
DNA repair and recombination proteins [BR:
piz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LAB08_R48750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
SLFN-g3_helicase
AAA_16
TrwB_AAD_bind
AAA_10
T2SSE
AAA_30
P-loop_TraG
AAA_19
AAA_7
CbiA
AAA_6
SRP54
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BCX70208
LinkDB
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Position
complement(5467246..5468733)
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AA seq
495 aa
AA seq
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MPDLSQLVIGADLSGQPIAQAMRLANRHGLIAGATGTGKTVTLQRMAEAFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKIAERIAGMPWLNHKPAAYPVTLWDIHGQSGHPLRTTLSEMGP
LLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDNPLLLGDDAALMTT
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPTAEGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFTGTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPGDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDTLSVLTEL
GIGEALVGTLQDKGTPEMVQRVLVAPPQSRIGPLTETERTVLIAGSPFKGRYDKPIDRES
AYEVLMGRKGLAPEPDAAPGKPAPQEPSFTEQAGEFLGTAAGQALKSAMRQAANQLGRQL
VRGLMGSLLGGSKRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatttatcgcaacttgttatcggcgccgacctttcagggcagccgattgcccag
gccatgcgcctggccaaccgtcacggtttgatcgcaggcgctacggggaccggcaagacg
gtcaccttgcaacgtatggccgaagccttcagcgatgccggcgtggcggtgttcgccgcg
gatatcaagggtgacctgtgtggtctgggcgccgcgggaaacccccagggcaagatcgcc
gagcggatcgccggtatgccgtggctgaaccacaagccggcggcgtatccggtgactttg
tgggacatacacggtcagtccggtcatccgttgcgcaccaccttgagcgaaatggggcca
ttgctgctgggcagccttctggaactgaccgacagtcagcagtcggcgctgtacgccgcc
ttcaaggtcgcggaccgcgaaggcctgttgctgctggacctcaaggacctcaaggcactg
ctcaaccacctcaaggacaacccgctactgctgggggacgatgccgcgctgatgaccacc
ggctccagccaggccctgttgcggcgcctggcgacccttgagcagcagggcgccgaggca
ctgttcggcgaaccggcgctgcaactcgaagatattctgcaaccgaccgccgaggggcgg
gggcgcattcatttgctcgacgccagtcgtctggtgcatgaggcgccgaaagtctacgcg
acctttctgctgtggctgttggccgagctgttcgagcagttgccggaacgtggtgacgcg
gataaaccgctgctggcgctgtttttcgacgaagcgcatttgttattcaccggcaccccc
aaggcgttgcaggatcgtctggagcaggtggtgcgattgatccgctcgaaaggcgtgggc
gtgtatttcgtcacccaatcgccgggtgatttgccggatgacgtgctggcacagctcggg
ttgcggatccagcatggtttgcgcgcgttcaccgccaaggaacagaaatcccttcgggcg
gtggctgacggctttcggccgaacccggcgttcgataccttgtcggttctgactgaactc
ggtatcggtgaagcattggtcggcaccttgcaggacaagggcacgccggagatggtccag
cgggtgttggtggcaccaccgcaatcacggatcgggccgttgaccgagaccgagcgcacg
gtgctgatcgccggttcgccgttcaaggggcgatatgacaaaccgatcgatcgcgagtcg
gcatacgaagtgctgatggggcgcaaggggctggcgccggagcccgacgcggcgccaggc
aaaccggcaccgcaagagccgagtttcaccgagcaggccggggagtttctcggtacggcg
gcggggcaggcacttaaatcggcgatgcgccaggcagcgaatcaattggggcgacagttg
gtgcgcgggttgatggggtcattattaggcggcagcaaacgccgctag
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