Pseudomonas izuensis: LAB08_R49200
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Entry
LAB08_R49200 CDS
T08555
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
piz
Pseudomonas izuensis
Pathway
piz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LAB08_R49200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piz02000
]
LAB08_R49200
Transporters [BR:
piz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LAB08_R49200
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DMSP_lyase
Motif
Other DBs
NCBI-ProteinID:
BCX70253
LinkDB
All DBs
Position
complement(5514858..5515766)
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AA seq
302 aa
AA seq
DB search
MEHQPLTHPVSVAPVRANRGVSPTARAWFFLSPSMLFLGVLIAASLLVLRMSVGTKGAEW
SGFSLASYAQLLEPYYLKSLILTLRLALISAVIAVLLAIPVAYTMSRLTSPFVRRIFLAA
VLLPLLVNLLLQSYGWLVILGPGGMLNQTLMGLGLIKRPIMLLYNQNGVLMGLVQTAFPL
AVLPIASAMRGVARSYEEAAATLGASRLQVFRQVVLPMSLPGIITGATLVFAYNASSFVV
PLLLGGRRVPMLAVMVHDQIAPLMNWPAASAAGVVLIVTTLAIMTLSEYITGRRRRMLEA
SQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccaacctctgacccatccggtgagtgtcgcccccgtgcgcgctaatcggggt
gtttcgcccacggcgcgcgcctggtttttcctttcgccgtcgatgctgtttctcggcgtg
ctgattgccgccagcctgttggtactgcgcatgagcgtgggcaccaaaggcgcggaatgg
tccgggttcagcctggccagttatgcccaattgctggaaccctattacctcaaatcgctg
atcctgacactgcgcctggcgctgatcagtgcggtgatcgcggtgctgctggcaatcccg
gtggcctacaccatgtcgcgcctgacttcgccgttcgtacgccggatcttcctggccgcg
gtgctgctgccgttgctggtcaacctgctgctgcaaagctacggctggctggtgatcctc
ggcccgggcgggatgctcaaccagacgttgatgggcctgggcctgatcaagcgtccgatc
atgctcctctacaaccagaacggcgtgttgatgggcctggtgcaaaccgctttcccactg
gcggtgctgccgattgccagcgccatgcgcggtgtcgcccgcagttacgaagaagccgcc
gcgaccctgggcgccagtcgcctgcaggtgtttcgccaggtggtgttgccgatgagcctg
ccggggatcatcaccggtgcgaccctggtattcgcctacaacgccagcagcttcgtcgtg
ccgctgctgctcggtggccgtcgcgtaccgatgctggcggtgatggtgcatgaccagatc
gccccgctgatgaactggcccgccgcatctgctgccggtgtggtgctgatcgtgaccacg
ctcgccatcatgaccttgtccgaatacatcacaggccgtcgtcggcgcatgctggaggct
tcgcaatga
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