Pseudomonas izuensis: LAB08_R49520
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Entry
LAB08_R49520 CDS
T08555
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
piz
Pseudomonas izuensis
Pathway
piz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAB08_R49520 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
piz03019
]
LAB08_R49520 (groL)
03110 Chaperones and folding catalysts [BR:
piz03110
]
LAB08_R49520 (groL)
03029 Mitochondrial biogenesis [BR:
piz03029
]
LAB08_R49520 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
piz04147
]
LAB08_R49520 (groL)
Enzymes [BR:
piz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LAB08_R49520 (groL)
Messenger RNA biogenesis [BR:
piz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LAB08_R49520 (groL)
Chaperones and folding catalysts [BR:
piz03110
]
Heat shock proteins
HSP60 / Chaperonin
LAB08_R49520 (groL)
Mitochondrial biogenesis [BR:
piz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LAB08_R49520 (groL)
Exosome [BR:
piz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LAB08_R49520 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LAB08_R49520 (groL)
Exosomal proteins of breast cancer cells
LAB08_R49520 (groL)
Exosomal proteins of colorectal cancer cells
LAB08_R49520 (groL)
Exosomal proteins of bladder cancer cells
LAB08_R49520 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BCX70285
UniProt:
A0ABM7RWX4
LinkDB
All DBs
Position
complement(5552901..5554544)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDSARKKMLTGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKALSKPCADTKAIAQVGTISANSDNSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPETMTAELDGPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGNAKRVTLSKENTIIVDGAGVQGDIEARIGQIRAQVAETSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAISELKGDNDDQNVGIQLLRRAVEAPLRQIVANSGDEPSVVVDKVKQGAGNFGYNA
ATGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIAEIKEDAPAGGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgattccgcccgcaagaaaatgctcaccggtgtc
aacgtcctggctgacgcggtaaaagcgaccctgggcccgaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgtagccaaggaaatc
gagctgaaagaccgtttcgaaaacatgggcgcgcagctggtcaaagacgttgcctcccgt
gccaacgatgacgcaggcgacggtaccaccaccgctaccgttctggctcagtcgatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctgaaacgcggtatc
gacaaggcgaccatcgccatcgtcaaagagttgaaagccctgtccaagccatgcgctgac
accaaggccatcgctcaggtcggcaccatctccgccaactccgacaactccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtcggttgttgaaggcatgcagttcgaccgtggctacctg
tccccttacttcgtcaacaagccagagaccatgactgccgagctggacggtccgctgatc
ctgctggtcgacaagaagatctcgaacatccgcgaaatgctgccagtactggaagccgtt
gccaaagccggccgtccacttctgatcgtggccgaagacgttgaaggcgaagccctggcg
actctggttgtgaacaacatgcgtggcatcgttaaagtcgcagccgtcaaggctccgggc
ttcggcgatcgtcgcaaggccatgctgcaggacatcgccgttctgaccggcggtaccgtt
atctccgaagagatcggcctgagcctggaaagcaccaccctggagcacctgggcaacgcc
aagcgcgtcaccctgtccaaggaaaacaccatcatcgttgacggtgctggcgtacagggc
gacatcgaagcacgcatcggtcagatccgtgcccaggttgccgagacttcctcggactac
gaccgtgaaaaactgcaagaacgcctggccaagctgtccggtggcgttgcagtgatcaag
gttggcgctggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgtgcagccgttgaagaaggcgtggtacctggcggcggcgtggcactggtt
cgtgccctgcaagccatcagcgagctgaaaggcgacaacgatgaccagaacgtgggcatc
cagttgctgcgtcgcgctgttgaagctccactgcgccagatcgttgccaactccggcgac
gagccaagcgttgttgtcgacaaggtcaagcaaggcgcgggtaacttcggttacaacgct
gcgactggcgaatacggcgacatgatcgaaatgggtatcctggacccggccaaagtgacc
cgttcggctctgcaagcggcttcgtcgattgccagcctgatgatcaccaccgaagccatg
atcgccgagatcaaggaagacgcaccagctggcggcggcatgccagacatgggcggtatg
ggcggcatgggcggcatgatgtaa
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