Pseudomonas izuensis: LAB08_R50060
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Entry
LAB08_R50060 CDS
T08555
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
piz03009
]
LAB08_R50060 (rlmF)
Enzymes [BR:
piz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
LAB08_R50060 (rlmF)
Ribosome biogenesis [BR:
piz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LAB08_R50060 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
UPF0020
Methyltransf_31
N6_Mtase
Methyltransf_25
Methyltransf_12
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
BCX70339
LinkDB
All DBs
Position
5610658..5611683
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AA seq
341 aa
AA seq
DB search
MNTPRTPKPARKKPDTATPAKAVEPREKASLHPRNRHQGRYDFPALIKSTPELAKFVIIN
PYGKESIDFASPDAVRVFNRALLKSFYGIAHWDIPADYLCPPVPGRADYVHFLADLLASG
NDGVVPRGAAVKVLDVGVGANCVYPLIGHSDYRWQFLGSEIDATAIAAARAIIQSNGLNK
AIQIRQQGNRKQILLGLLESTERFDLTMCNPPFHSSLEEATRGSSRKWRALGKADPKRKL
PVLNFGGQAAELWCEGGEARFVTQLIGESAQVGQQVLWFSTLVSKASNLPAIQTALKKAG
ALQSQVVEMSQGQKQSRFVAWTFQTPAQQQAWRERWARKTE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccctcgtacacccaaacctgcgcgcaagaagcctgacaccgcgactccggcc
aaagccgtggaaccgcgtgaaaaggccagcctgcacccgcgcaatcgccatcagggtcgt
tacgacttcccggcgctgatcaaaagcacgccggagttggcgaagttcgtgatcatcaat
ccgtatggcaaggaaagtatcgactttgccagcccggatgcggtgcgagtgttcaaccgg
gcactgctcaagtcgttctacggcatcgcccattgggacattcccgccgactacctgtgc
ccgccggttccgggtcgggcggactacgtacatttcctcgccgacctgctggccagcggc
aatgacggcgtggtcccccgtggggcggcagtgaaggtgctggacgtcggcgtgggcgcc
aactgcgtgtatccgctgatcggtcacagcgactaccgctggcagttccttggctcggaa
atcgacgccaccgccattgccgcagccagggccatcattcagtcaaatggcttgaacaag
gccatccagattcgccagcaaggcaaccgcaaacagatcctgctgggcttgctggagagc
accgaacgctttgacctgacaatgtgcaacccaccgttccactcgtccctggaagaagcc
acacgcggcagcagccgcaaatggcgcgcgctgggcaaggccgatccaaaacgaaaattg
ccggtgctgaatttcggcggtcaggcggccgagttgtggtgcgagggtggcgaggcgcga
ttcgttacgcaattgatcggcgagagcgctcaggtgggtcagcaggtgctgtggttcagt
accctggtgtccaaagcgtcgaatctgccggcgatccagacggcgctgaaaaaggccggc
gcactgcaaagccaggtggtggaaatgtcccaaggccagaagcagagccgtttcgtggcg
tggactttccagactccagcccagcagcaggcctggcgcgagcgctgggcgcgcaaaacc
gagtaa
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integrated database retrieval system
