Pseudomonas izuensis: LAB08_R51350
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Entry
LAB08_R51350 CDS
T08555
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R51350 (phrB)
Enzymes [BR:
piz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LAB08_R51350 (phrB)
DNA repair and recombination proteins [BR:
piz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LAB08_R51350 (phrB)
Prokaryotic type
LAB08_R51350 (phrB)
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Gene cluster
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BCX70468
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All DBs
Position
5751140..5752585
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AA seq
481 aa
AA seq
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MQLIWLRSDLRVTDNTALCAATAVGPSVAVYLLSPQQWLEHDDAPCKVDFWLRNLHELKQ
ALGELNIPLLIRHAPRWEDAPNVLLDICLRLNINAVYLNEEYGIHETRRDAAVTEALKAQ
GIDVHRYLDQLLFKPGSVLTKTGTYFQVFSQFRKACHERMYRSLPSLVSTPMAQAPLSIA
SDEIPTHIEGFAPPTGHLRALWPAGEAEARRRLDTFTDVQIDYYQSERDFPAKPGTSQLS
AYLAAGVISPRQCLHAALQSNQGEFDSGKVGAVTWINELLWREFYKHILVGYPRVSRHRA
FRAETEALAWRDAPDELAAWQQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSEKFDTEGVFIK
HWLPELAGLNKKEVHNPASLGGLFGVADYPSPIVDLHTSRARALAAFKSLRPRQSAGGDY
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatctggctgcgcagtgatttacgcgtaaccgacaacaccgccctctgcgcc
gccacagcggtcggcccgagcgtggcggtgtatttgttgagcccgcagcaatggctggaa
cacgacgatgcaccgtgcaaggtggacttctggctgcgcaaccttcatgaactgaaacag
gcactgggtgaactgaatattcccctgctgatccgccatgctccgcgctgggaggatgcg
cccaatgtgctactggatatttgcctacggctgaacatcaatgccgtgtacctcaatgag
gaatacggcattcatgaaacccgtcgggacgcagcggtgaccgaagcattgaaggcccag
ggaatcgacgttcaccgctacctggatcagttgctgttcaaacctggaagcgtactgacc
aaaaccggcacgtatttccaggtcttcagccagttccgcaaagcctgccatgaacgtatg
taccgctcgttacccagcctggtcagcacccccatggcgcaagcgccgttgagcatcgcc
agcgacgagatcccgacccacatcgagggcttcgccccacccaccgggcatttgcgcgcc
ctgtggccggccggagaagccgaagcacggcgccgcctcgacacctttaccgacgtacaa
atcgattattaccaaagcgaacgggacttcccggcgaaacccggtacgagccaactttcg
gcttacctcgctgccggggtgatttccccacgccaatgcctgcacgccgcgttacaaagc
aatcagggggagttcgacagtggcaaggtcggcgccgtgacctggatcaatgaactgctg
tggcgtgagttctataaacacattctggtgggctacccaagggtttcccgccaccgcgct
ttccgcgcggaaaccgaagcgctggcctggcgcgacgcgcccgacgaactcgcagcctgg
caacaggcccgcaccggtttgccgatcatcgacgccgccatgcgtcaactgttggaaacc
ggctggatgcacaaccgcttgcgcatggttgttgcaatgtttttgaccaaaaatctgttg
atcgactggcgcgaaggcgaacgttttttcatgcgccacctgatcgatggcgacctggca
gcgaacaatggtggctggcaatggagttcatccaccggcacggactcggcgccctacttc
cggattttcaatccactgagccagtcggaaaaattcgataccgagggcgtgttcatcaag
cactggctgccggaattggcaggactgaataaaaaagaagtgcacaatccggcgagtctc
ggtggactgttcggcgtggcggattatccgtccccgattgtcgacctgcacacttcacgt
gcacgggccctcgccgcgttcaagagcctgcgaccacggcaaagcgccgggggcgactat
gagtaa
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