Pseudomonas izuensis: LAB08_R51650
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Entry
LAB08_R51650 CDS
T08555
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00470
D-Amino acid metabolism
piz00550
Peptidoglycan biosynthesis
piz01100
Metabolic pathways
piz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LAB08_R51650 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LAB08_R51650 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LAB08_R51650 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
piz01011
]
LAB08_R51650 (ddlA)
Enzymes [BR:
piz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LAB08_R51650 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
piz01011
]
Precursor biosynthesis
Amino acid ligase
LAB08_R51650 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
ATPgrasp_ST
CPSase_L_D2
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
BCX70496
LinkDB
All DBs
Position
complement(5781256..5782350)
Genome browser
AA seq
364 aa
AA seq
DB search
MSKLRVGIIFGGRSAEHEVSLQSAKNIVDALDRSRFEPVLIGIDKQGHWHLNDPSNFLLN
QENPALIALNQSNRELAVVPGKASQQLVETSSQELLGHVDVIFPIVHGTLGEDGCLQGLL
RMADLPFVGSDVLGSAVCMDKDISKRLLRDAGLAVTPFVTLTRASAARSRFDEVMGKLGL
PLFVKPANQGSSVGVSKVTDEAEYTAAIELALGFDEKVLVESAVSGREIECAVLGNENAI
ASGCGEIVVHSGFYSYDSKYIDDKAAEVVVPANISVEANERIRAMAVEAFQVLGCSGLAR
VDVFLTDSGEVLINEINSLPGFTRISMYPKLWQATGMTYSELVTRLIELALEKHQARRAL
KISR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaattgcgtgtaggaattatctttgggggccgctcggcggagcatgaagtgtcg
ctgcagtcggcgaaaaacatcgtcgatgccctggatcgttcgcgtttcgaaccggtgctg
atcggcatcgacaagcaaggccactggcacctcaacgacccttcgaacttcctcttgaac
caggaaaatccggccctcatcgcgctcaatcaatccaatcgcgagttggcggtcgtgccg
ggcaaggccagccagcagttagtggaaacctccagtcaggagctgttgggacatgtcgat
gtcattttcccgattgtccacggcaccctcggtgaggacggctgcctgcaaggcctgctg
cgcatggcggatctgccgtttgtcggttccgatgtgctgggatcggcagtgtgcatggac
aaggacatcagcaaacgcttgttgagggatgcggggctggcggtcacgccgttcgtaacc
ctgacccgcgccagcgcggcacgcagccgattcgacgaagtgatggggaaattggggttg
cctctcttcgtcaaaccggcaaaccagggttcatccgtaggggtgagcaaggtcaccgac
gaagccgaatacacggcggcgatcgagctggcactggggttcgatgaaaaagtgctggtc
gaatccgccgtcagtggccgcgagatcgaatgcgcggtgcttggcaatgaaaacgccatc
gccagcggttgcggtgagatcgtggtgcacagcgggttttattcctacgacagcaagtac
atcgacgacaaggccgctgaagtggtggtgccggccaacatcagcgtcgaggccaacgag
cgcatccgtgccatggcggtcgaagcgtttcaggtgctggggtgttccggactggcgcgg
gtcgatgtgtttttgaccgacagtggcgaagtgctgatcaacgaaatcaactccctgccg
gggttcacccgcatcagcatgtacccgaaactgtggcaagccaccggaatgacctacagt
gaactggtcacgcggctgatcgaactggccttggaaaaacaccaggctcgacgggctctg
aaaatcagtcgatag
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