Pseudomonas izuensis: LAB08_R51960
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Entry
LAB08_R51960 CDS
T08555
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00550
Peptidoglycan biosynthesis
piz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LAB08_R51960 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
piz01003
]
LAB08_R51960 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
piz01011
]
LAB08_R51960 (mrcB)
Enzymes [BR:
piz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LAB08_R51960 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LAB08_R51960 (mrcB)
Glycosyltransferases [BR:
piz01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LAB08_R51960 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
piz01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LAB08_R51960 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
BCX70522
UniProt:
A0ABM7S6A1
LinkDB
All DBs
Position
complement(5814648..5816972)
Genome browser
AA seq
774 aa
AA seq
DB search
MTRTRSPRTPKKPPSRGLRPWLGWALKLSLVGLVVLAGFAVYLDAIVQEKFSGKRWTIPA
KVYARPLELFVGQKLSRDDFLTELDALGYRRESVSNGPGAAAVNGNTVDLNTRGFQFYEG
MENAQPVRVRFSGDYVAELSATNGSKLSVVRLEPLLIGGIYPKNLEDRILIKIDQVPPYL
LETLVAVEDRDFYSHWGVSPKSIVRAIYVNTSGGKMTQGGSTLTQQLVKNFYLTSERSLS
RKLTEAMMAMLLELHYDKRDILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSELKLH
QVAMLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAKKMPLGVTTRG
KLADSSFPGFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLAGR
KGSDDVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLIKPAVYLTALEKP
SQYTLTSWLSDESFSVKGADGQVWKPQNYDRRSHGTVFLYQGLAHSYNLSTARLGLAVGV
PNVLKTLGRLGVSREFPAFPSMLLGAGGMTPIEVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQRFDPASIYLIQSAMQRVMREGTGSSVYNVLPKTLTLAGKTGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLDMPQPDNIVQA
WVDSRTGQGSDANCPGAVQMPYIRGSEPPPGAACGGESPTPGETVMDWVKGWMN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtactcgatccccccgtacccctaaaaaaccaccttcccgaggcctgcggccc
tggctgggctgggcccttaaactcagtctggtcggccttgtggtgctggccggattcgcg
gtttacctggatgccatcgtgcaggaaaagttttccggcaagcgctggacgattccggcc
aaggtatacgcgcgtccgcttgagctgttcgtcggacaaaagctgagccgggacgatttt
ctgaccgagcttgatgctttgggttaccgacgcgaaagcgtcagcaatggcccgggtgcg
gcggcggtcaatggcaataccgtcgacttgaatacccgtggcttccagttctatgagggc
atggagaatgctcaaccggtgcgtgtgcgtttctctggtgactatgtcgccgaactctcg
gcgacgaacggttcgaagctctccgtggtccgcctggagccgcttttaatcggtgggatt
tacccgaagaacctcgaagaccgcattctgattaaaatcgatcaggtcccgccgtatctg
ctggaaacgctggtcgccgtggaagaccgggatttctatagtcactggggcgtgtcgccc
aaatcgattgtacgagccatctacgtcaacacctctggcggcaagatgacccagggtggc
agtacgctgacgcaacaactggtcaagaacttctacctgaccagcgaacgcagcctgagt
cgcaagctcaccgaagccatgatggcgatgttgcttgagctccattacgacaaacgagac
attcttgaggcttacctcaatgaagtgttcgtcggccaggatggtcagcgggcggtgcat
ggtttcggtctggccagtcagttcttcttcgggcagccattgtccgaactgaagctgcat
caagtcgcgatgctggtgggcatggtcaagggcccgtcttactacaacccacgtcgcaat
cccgagcgggcactcgaacgacgcaatctggtgctcgatgtgcttgagcaacaaggcgtc
gccaccgccgagcaggtcgccgccgcgaagaaaatgccgttgggcgtgacaacgcgaggc
aaattggcggacagctccttccctggcttcctcgacctggtcaagcgtcaactgcgcgaa
gactatcgcgatgaagacttgaccgaggaaggcctgcgcatcttcaccagcttcgacccg
atcctgcagatgaaggctgaagcctcggtcaacgacaccttcaagcgtctggccgggcgc
aagggttccgatgatgttgaagcggcgatggtcgtgaccaacccggaaaccggtgaagtc
caggccatgattggcagccgccaggccagtttcgccggcttcaaccgtgcactggacgcg
gtgcgaccgatcggctcgctgatcaagccggcggtttatctgacagcgctcgagaagccg
agtcagtacacgttgaccagttggctgtcagacgaatccttctcggtcaaaggtgcggac
ggtcaggtctggaaaccgcagaactatgatcggcgctcccacggcacggttttcctttat
caaggcctggcgcactcctataacctgtcgaccgcacgtctcggtctggcggtcggtgtg
ccgaatgtcctcaagaccctgggccgcctgggtgtgagccgcgaatttccggccttcccg
tcgatgttgctgggggcgggcggcatgaccccgattgaagtggcgaccatgtaccagacc
ctcgccaacggtggtttcaatacaccgatgcgcgggattcgcagcgtactgacagccgaa
ggcgaaccgctcaagcgctatccgttccagattcagcagcgtttcgacccggcgtccatc
tacctgatccagagcgccatgcagcgggtcatgcgtgaaggtacgggcagctcggtttac
aacgtgttgccgaagaccctgacgctggcgggcaagaccggtaccagtaacgattcgcgg
gacagctggttcgccggtttcagccaggatctgctggcggtggtctggttgggccgggat
gacaacggcaagacgccattcactggtgccaccggtgcgttgcaggtctggaccagtttc
atgcgcaaggccgacccgttgccgctggacatgcctcagccggataatatcgttcaggcc
tgggtcgattcccggaccgggcaaggctccgatgccaattgcccaggcgccgtgcagatg
ccgtatattcgcggcagcgaaccgcctcccggcgctgcatgtggtggcgaaagccccacg
cctggcgaaacggtgatggattgggtcaagggctggatgaattaa
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