Pseudomonas izuensis: LAB08_R52080
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Entry
LAB08_R52080 CDS
T08555
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
piz
Pseudomonas izuensis
Pathway
piz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAB08_R52080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
piz03019
]
LAB08_R52080
Enzymes [BR:
piz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LAB08_R52080
Messenger RNA biogenesis [BR:
piz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LAB08_R52080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BCX70534
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All DBs
Position
5829428..5830828
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AA seq
466 aa
AA seq
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MLKKLFQSFRSPKRPTQHIRSTPEVLNSGQHSLQKAQFSRYAVNIVERLQSAGYQAYLVG
GCVRDMLLGITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAN
HPQNDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNHLIRLIGDPKQRYQEDPVRMLRAVRFAAKLNFGIEKHSALPIRDLAPMLREIPAA
RLFEEVLKLFLSGHAADTFEMLVDLQLFDPLFPASAEALEYNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPARVLRLQERGMPPIPAMQEAAHELIAEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSERRDMIRDLSGKDEGTGAPRKRRRSGGSKRKRAAGVSSTSGE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtcattccgttctcccaagcgtcctacgcaacatattcgc
agcacgcctgaagtgctcaacagcggccaacattcgctgcaaaaggcacaattcagccgc
tacgcggtgaatatcgttgaacgcctgcagagcgccggttatcaggcttacctggtgggt
ggttgcgtgcgcgacatgctgctgggtatcacaccgaaagatttcgacgttgccaccagc
gccacccccgaacaggtacgggccgaattccgtaacgcgcggatcatcgggcgccgattc
aaactggtgcatatccacttcggccgcgaaatcatcgaagtcgcgaccttccgcgccaat
cacccgcaaaacgatgaggaagaagacagcaaccagtcttcccgcaacgagagcgggcgc
atcctgcgcgataacgtctacggcaccctggaggaagacgcgcaacgtcgcgatttcacc
atcaacgccctgtattacgatccggtcagcgagcgcatcctcgactacgccaacggtgta
cacgacatccgcaaccacctgatccgcctgatcggtgatccgaaacaacgctatcaggaa
gacccggtacggatgctgcgggccgtgcgtttcgcggcgaagctgaatttcggcatcgaa
aaacacagcgccctgccgatccgcgatctggcaccgatgctgcgcgagatcccggcggcc
cgcctgttcgaagaagtgctcaagctgttcctctccggccatgccgcggacaccttcgaa
atgctggtcgacctgcaattgttcgatccgctgttcccggccagtgccgaggcgctggaa
tacaacccgacctatacccatacgctgatcagcgaagcactgatcaacaccgacctgcgg
atcaagcagaacaaaccggtgaccccggcgttcctgtttgccgccctgctatggcctgcc
ctgccggctcgcgtattgcgcctgcaagaacgtggcatgccaccgattccggcgatgcag
gaagcggctcacgagctgattgccgaacagtgccagcgcatcgcgatcccaaaacgcttc
accatgccgatccgcgagatctgggacatgcaggagcgcctgccacggcgcagcggcaaa
cgtgccgacctgctgctggacaacccgcgcttccgcgccggttacgacttcctgttgctg
cgcgaaagcgcgggcgagcagaccgatggcctgggtgaatggtggacggactatcaggac
gccaacgacagtgagcgtcgcgacatgatccgtgacctcagcggcaaagacgaaggcacc
ggtgcaccgcgcaaacgtcgccgcagcggcggctccaagcgcaagcgcgccgcgggcgtt
tcgagcacctcgggcgagtaa
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