Pseudomonas izuensis: LAB08_R52220
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Entry
LAB08_R52220 CDS
T08555
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
piz02044
]
LAB08_R52220
02035 Bacterial motility proteins [BR:
piz02035
]
LAB08_R52220
Secretion system [BR:
piz02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
LAB08_R52220
Bacterial motility proteins [BR:
piz02035
]
Pilus system
Pilus assembly proteins
LAB08_R52220
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
ExoD
T4_gp9_10_N
Baculo_11_kDa
DUF1189
MIP-T3_C
ThiF
Motif
Other DBs
NCBI-ProteinID:
BCX70548
LinkDB
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Position
5846598..5847815
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AA seq
405 aa
AA seq
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MAVKAAKISIYAWEGTDRKGTKVTGELSGQNPALIKAQLRKQGINPGKVRKKTVSLFNMG
KRIQAQDIALFTRQMATMMKAGVPLLQSFDIIAEGFDNPAMRTLVDEVKQEVAAGNSFAA
ALRKKPRYFDELYCNLVDAGEQAGALDTLLERVATYKEKSESLKAKIRKAMTYPLVVVCV
AMVVTAILLVKVVPQFQSVFEGFGAQLPAFTVMVIGLSRFMQDGWWMMLGALIATILGAR
HAFRTSQGFRDRTDAWLLKLPLVGTLMYKSAVARFARTLSTTFAAGVPLVEALESVAGAT
GNIVFKRAVLRIKQDVSTGMQLNFSMRASGIFPNMAIQMTAIGEESGALDAMLDKVAGFY
EDEVDNMVDNLTSLMEPFIMVVLGVIVGGLVVAMYLPIFQLGSAI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaaagcagcgaaaatcagcatttacgcctgggaaggcaccgaccgcaaaggc
acgaaagtcaccggcgagttaagcgggcagaacccggcactgatcaaggcgcaactgcgt
aaacaaggcatcaaccccggcaaggttcgcaagaaaaccgtctcgctgttcaacatgggc
aagcgcatccaggcccaggacatcgccttgttcacgcgccagatggcgaccatgatgaaa
gccggcgtgccgctgttgcagtcgttcgacattattgccgaaggcttcgataacccggcc
atgcgcaccctcgtggacgaggtcaaacaggaagtcgcggcaggcaacagtttcgccgcc
gccctgcgcaagaaaccccggtatttcgatgagctgtactgcaatctggtggatgccggt
gagcaggccggcgccctggataccctgttggagcgggtggcgacctacaaggaaaagagc
gaaagcctcaaggccaagatcaggaaagccatgacctacccgctggtcgttgtgtgtgtc
gccatggttgtgaccgcgatcctgctggtcaaagtagtgccgcagttccaatcggtgttc
gaagggtttggcgcccaattgcctgcctttaccgtgatggtcattggcctgtcgcgtttc
atgcaggacggctggtggatgatgctcggtgcgctgatcgcaacgatcctgggtgcacgc
catgctttcaggacgtcacaaggctttcgcgatcgaaccgacgcctggctgctgaagctg
ccgctggtggggacgctgatgtataaatcggccgtggctcgttttgcccgcaccctgtcg
accaccttcgccgccggtgtccccttggtggaagccctggagtcggtggccggcgccacc
ggtaacatcgtgttcaagcgcgcggtgctgcgcatcaagcaggacgtttcgacagggatg
cagttgaacttttccatgcgcgcttccggcatttttccgaacatggccatccagatgacc
gccatcggcgaagagtccggcgcactggacgccatgctcgacaaggtcgcgggtttctat
gaagacgaggtagacaatatggtcgataacctcaccagcctgatggaaccgttcatcatg
gtggttttgggtgttatcgtcggcggcctggtggtcgcgatgtacttgcccatctttcaa
ctcggctcagcgatctga
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