KEGG   Pseudomonas izuensis: LAB08_R53300
Entry
LAB08_R53300      CDS       T08555                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
piz  Pseudomonas izuensis
Pathway
piz03030  DNA replication
piz03430  Mismatch repair
piz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:piz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LAB08_R53300
   03430 Mismatch repair
    LAB08_R53300
   03440 Homologous recombination
    LAB08_R53300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:piz03032]
    LAB08_R53300
   03400 DNA repair and recombination proteins [BR:piz03400]
    LAB08_R53300
Enzymes [BR:piz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LAB08_R53300
DNA replication proteins [BR:piz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LAB08_R53300
DNA repair and recombination proteins [BR:piz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LAB08_R53300
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ribosomal_L26 RNase_H_2 DUF1059
Other DBs
NCBI-ProteinID: BCX70652
UniProt: A0ABM7S6Q6
LinkDB
Position
complement(5956935..5957546)
AA seq 203 aa
MERIAVIDFETTGISPSSSCRATEIAVVILEQGRIVERYQSLMNAGVRVPAFIEQLTGIS
NAMLRTAPSAEQVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFANLPHTGKAHRAMADAEMAANLTAHLAEELRQKHGLRELSHD
LLCKLQKVPAAKVGEHLKRYRGV
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgcatcgcagtcatcgactttgaaaccaccgggatctccccgagcagcagctgt
cgggccacggaaattgccgtggtgattcttgaacaggggcgcatcgtcgagcgttaccag
agcctgatgaacgccggcgtgcgcgtcccggccttcatcgaacaactcaccggcatcagc
aacgccatgttgcgcacggctccctcggcggagcaggtgatgaacgaagtcaatgagttc
gtcggcaccacgccgttgctggcgcacaacgccgcgttcgaccagaagttctgggatttc
gagctgggacggatcaagcgcacccgcctgcaaaactttgcctgctcgctgctgctggcc
cgtcgcctgatgcccgcggcgccgaaccacaaactcggcaccctcaccaccttcgccaac
ctgccccacaccggcaaggcccaccgggccatggccgatgcggaaatggccgccaacctg
acggcgcacctggctgaagagttgcgtcagaaacacgggctgcgcgagttgtcccatgat
ttgctgtgcaagttgcagaaagtgccggcggcgaaggtgggtgagcacctcaagcgctat
cgcggggtctga

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