Pseudomonas izuensis: LAB08_R53560
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Entry
LAB08_R53560 CDS
T08555
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
piz03016
]
LAB08_R53560 (miaB)
Enzymes [BR:
piz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LAB08_R53560 (miaB)
Transfer RNA biogenesis [BR:
piz03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LAB08_R53560 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
BCX70678
LinkDB
All DBs
Position
5985144..5986472
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AA seq
442 aa
AA seq
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MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPDMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAART
SKLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VIAEIIHLAENGVREVTLLGQNVNGYRGTTHDGRLADLAELIRVVAAVDGIDRIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGI
CISSDFIVGFPGETEKDFEQTMKLIQDVGFDFSYSFVYSQRPGTPAADLADDTPEALKKE
RLNALQHRLNQQGFEISRQMVGSIQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPTLI
GQFADVRIDAAQPHSLRGSLIQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgatctgctgggcgaacaccaggccctggaagtcactgctcgggcagaagat
gccgacgtgatcctgctcaacacctgctcgatccgcgagcgcgcccaggatcgcgtctac
tcgcagctcggccgctggcgcgaactgaaactggccaatccggacatggtgattgccgtc
ggcggttgcgtggccagccaggaaggcgccgccatccgcgatcgcgcgccctatgtcgac
gtggtgtttggcccgcaaaccctgcaccgcttgccggaaatgatcgacgccgcgcgcacc
agcaagttgccgcaagtcgatgtttcgttcccggaaatcgaaaaattcgaccacttgccc
gagccgcgcatcgacggcccgagtgcctacgtgtcggtgatggaaggttgcagcaagtac
tgcaccttctgcgtggtgccctatacccgcggcgaagaagtcagccgtccgttcgacgat
gtgatcgccgagatcattcacctggccgaaaatggcgtgcgcgaagtgacgctgctgggg
cagaacgtcaacggttatcgcggcaccacccatgacggtcgcctggccgatctggccgag
ctgatccgggtggtcgcggccgtcgatggcatcgaccgcatccgctacaccacctcgcac
ccgctggaattctccgacagcctgatccaggcccatgccgaggtccccgaactggtgaaa
cacctgcacttgccggtgcagtcgggttcggaccggatcctggccgcgatgaagcgcaac
cacaccgcgcttgagtacaaatccaaactgcgcaagctgcgggccgccgtgcctggtatc
tgcatcagctcggacttcatcgtcggcttcccgggcgagaccgaaaaagacttcgaacag
accatgaagcttatccaggacgtcggcttcgacttctcctactcgttcgtctacagccag
cgtcccggaacaccggctgccgatctggccgatgacacgccggaagcactgaaaaaagag
cgcctgaatgccctgcaacatcgcttgaaccagcaaggtttcgaaatcagccgacaaatg
gtcggttcgatccagcgcatcctggtcaccgactactcgaaaaaagaccccggcgagttg
caaggccgcaccgaaaataaccgtatcgtcaacttccgctgcgacaatccgactttgatc
ggccagttcgccgatgtgcgcatcgatgcagcgcagccacactcgttgcggggctcgctg
atccagtaa
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