Pseudomonas izuensis: LAB08_R53650
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Entry
LAB08_R53650 CDS
T08555
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
piz
Pseudomonas izuensis
Pathway
piz03030
DNA replication
piz03430
Mismatch repair
piz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAB08_R53650
03430 Mismatch repair
LAB08_R53650
03440 Homologous recombination
LAB08_R53650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
piz03032
]
LAB08_R53650
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R53650
Enzymes [BR:
piz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAB08_R53650
DNA replication proteins [BR:
piz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAB08_R53650
DNA repair and recombination proteins [BR:
piz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAB08_R53650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
CCCAP
Motif
Other DBs
NCBI-ProteinID:
BCX70687
LinkDB
All DBs
Position
5995452..5996489
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGALAPVYVISGDDPLLCQEAADAIRAAARQQGFDERQVFAADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA
QKTKWGKALVEGQQTQFVQIWPVDVSQLPSWIRQRLSQAGLSATQDAVELIAARVEGNLL
AAAQEIEKLKLMAEEGQITVETVQAAVADSARFDVFGLTDAILNGEAAHALRMLEGLRGE
GVEPPVILWALARELRLLANISLQYSQGTPLDKAFSQARPPVWDKRKPLMSKALQRYSAQ
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLTLLMAGQRLSLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgctcccgcccaactcggcaaacacctgcaaggtgccctcgcgccggtctac
gtgatcagtggcgatgaccccttgctgtgtcaggaagccgccgacgccatccgcgccgct
gcccgtcagcagggcttcgatgagcgccaggtttttgccgccgacgccagtttcgactgg
ggtacgttgctgcaggccggtgccagcatgtcgctgttcgctgagaagcgcttgcttgaa
ctgcgcctgccctctggcaaaccgggtgacaaaggtgccgccgcgctcattgaatactgc
tcgcgaccggccgaagacacggtgttgctgatcagcctgccaaagctcgatggcagcgcg
cagaaaaccaagtggggcaaggcgctggtcgaaggccagcagacacagttcgtgcaaata
tggccggtggatgtcagccagctgccgagctggatccgccaacgtttgtcccaggccgga
ctgtccgccacacaggatgccgtcgaactgatcgccgcccgggtcgagggcaacctgttg
gctgccgcccaggaaatcgaaaagctcaagctgatggccgaagaaggtcagatcactgtc
gaaaccgtgcaggctgcggtggctgacagcgcgcgcttcgatgtcttcggactgaccgat
gcgattctcaacggtgaagccgcccacgcgctgcgcatgctcgaagggttgcgcggtgaa
ggtgtcgaaccaccggtgattctctgggccctggccagggagctgcgtctgctggccaat
atttccctgcaatacagccaaggcacgccgctggacaaagccttcagccaggccaggccg
cccgtttgggacaagcgcaaaccgctgatgagcaaagccctgcaacgctattcagcgcaa
cgctgggcgcaattgctgctcgaagcacagcgcatcgatgcgcagatcaaggggcaggca
gccgggtcaccgtggatgagcttgagccggttgacgctgttgatggctggccagcggttg
tcgttgcccgccgagtaa
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