Pseudomonas izuensis: LAB08_R54090
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Entry
LAB08_R54090 CDS
T08555
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00900
Terpenoid backbone biosynthesis
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LAB08_R54090 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
piz01006
]
LAB08_R54090 (ispA)
Enzymes [BR:
piz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LAB08_R54090 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LAB08_R54090 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
LAB08_R54090 (ispA)
Prenyltransferases [BR:
piz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LAB08_R54090 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BCX70731
LinkDB
All DBs
Position
6043762..6044649
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AA seq
295 aa
AA seq
DB search
MIAAYSATSQVRVNAALETLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGG
KAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLA
FSALLDPRLSNADADIRLQMVSALAQAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHK
TGALIEVSVTLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGA
DIARDKPTYPSLLGLDAAKAYALELRDQALHALRPFDAAAEPLRDLARYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagcgtattcggcgaccagccaggtccgcgtcaacgccgccctggaaaccctg
ttcaccgcgccgagcccagagctggcgcgcctgtacgaagccatgcgctacagcgtgatg
aacggtggcaagcgcgtgcgtccattgctggcctatgccgcatgcgaagcgctgggcggc
aaggccgagcaagccaacggcgcagcctgcgcggtggagttgatccacgcttattcgctg
gtgcatgacgatttgccggcgatggacgacgacgatctgcgtcgcggccaacccaccacc
cacaagaaattcgatgaagcctgcgcgatcctcgccggcgacggtttgcagagcctggcc
ttcagcgccctgctcgacccgcgcctgagcaacgctgacgcagacattcgcctgcaaatg
gtcagcgcgctggcgcaggccgcaggcccggcgggcatggtcggtggtcaagccatcgat
ctgggctcggtcggcctgaagctcgatcagaaagccctcgaatacatgcaccggcacaaa
accggcgcactgatcgaagtcagcgtcacactcggtgccctggccagtggccgtgccgag
aaggacgaactcaaatccctgcagacttatgcacaggccatcggcctggcgttccaggtc
caggacgacatcctcgacgtcgaaagcgataccgaaaccctcggcaaacgccagggcgcc
gacattgcccgcgacaagccgacctacccgtccctgctcgggctcgacgccgccaaggcc
tacgccctggaactgcgcgatcaggcgctgcacgcactgcgaccgtttgacgcggccgcc
gagccattgcgcgatctggcccggtatatcgtcgagcgccgtcactga
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