KEGG   Pseudomonas izuensis: LAB08_R55900
Entry
LAB08_R55900      CDS       T08555                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
piz  Pseudomonas izuensis
Pathway
piz03030  DNA replication
piz03430  Mismatch repair
piz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:piz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LAB08_R55900
   03430 Mismatch repair
    LAB08_R55900
   03440 Homologous recombination
    LAB08_R55900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:piz03032]
    LAB08_R55900
   03400 DNA repair and recombination proteins [BR:piz03400]
    LAB08_R55900
Enzymes [BR:piz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LAB08_R55900
DNA replication proteins [BR:piz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LAB08_R55900
DNA repair and recombination proteins [BR:piz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LAB08_R55900
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: BCX70902
UniProt: A0ABM7S781
LinkDB
Position
6235363..6236070
AA seq 235 aa
MSLFSWLRPATPSLSAELQERLQRLPAATALSECSLREQRWVVLDLETTGLNLHKDRVLS
IGAVVIEDGAIDFRQQFERTLQCAELKLGPSVLIHGLGPSAIAAGSDPAQALLEFMEFVG
DSPLLAFHAPFDQHMLGRALKDHLGYKLQHAFLDVADIAPLLCPQANIREAGLDEWIDWF
KLEVFERHNASADALATAELALILFSRARQQQVHSPLNLQQRLNQWKRRQQSPSF
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcctgttttcatggctacgcccggccaccccgagtctgtccgctgaactgcaagaa
cgtctgcaacgcttaccggcggccaccgcgctgagtgaatgcagcctgcgcgaacaacgc
tgggtcgtactcgatctggaaaccaccgggcttaacctgcacaaggatcgggtgctgtcc
atcggcgcggtggtgatcgaggatggtgcgatcgatttccgtcagcagttcgaacgcacc
ctgcaatgtgccgaactcaaactcggccccagtgttctgattcacggcctggggcccagc
gcgattgccgccggcagtgatccggcgcaggcactgctcgagttcatggagttcgtcggc
gacagcccgctgctggcctttcatgcgccgttcgaccagcacatgctcgggcgcgcgctg
aaagaccatctgggctacaagttgcagcatgcctttctggacgtggcggacatcgcaccg
ttgctgtgcccgcaggccaatatccgcgaggcagggctggacgagtggatcgactggttc
aagctggaagtcttcgagcgccacaacgccagtgccgacgccctggccaccgccgaactg
gcactgatcctgttcagccgcgcgcggcagcagcaggtgcatagcccgttgaatttgcag
cagcggttgaatcaatggaagcggcggcagcaatcgccgtctttctga

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