Pseudomonas izuensis: LAB08_R56090
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Entry
LAB08_R56090 CDS
T08555
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00260
Glycine, serine and threonine metabolism
piz00460
Cyanoamino acid metabolism
piz00630
Glyoxylate and dicarboxylate metabolism
piz00670
One carbon pool by folate
piz00680
Methane metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01120
Microbial metabolism in diverse environments
piz01200
Carbon metabolism
piz01230
Biosynthesis of amino acids
piz01240
Biosynthesis of cofactors
piz04981
Folate transport and metabolism
Module
piz_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LAB08_R56090
09102 Energy metabolism
00680 Methane metabolism
LAB08_R56090
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LAB08_R56090
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LAB08_R56090
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LAB08_R56090
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LAB08_R56090
Enzymes [BR:
piz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LAB08_R56090
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BCX70921
LinkDB
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Position
complement(6255035..6256288)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTKTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKEADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVTLAGWICDILDNLGDADVEANVAQQVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtccgagaactacaccagc
aagcgcgtgatggaagcgcaaggcagcggcctgaccaacaaatacgccgaaggttatccg
ggcaagcgctactacggtggctgcgaacacgtcgacaaggttgaagccctggccatcgaa
cgcgccaagcaactgttcggcgccgattacgccaacgtgcagccgcactccggttcctcg
gccaacagcgccgtgtacctggccctgctgcaagccggcgacaccatcctgggcatgagc
ctggcccacggtggtcacctgacccacggtgccaaggtgtcgtcctcgggcaagctgtac
aacgccgttcaatacggtatcgacaccaagaccggcctgatcgattacgacgaagtcgag
cgcctggccgtcgagcacaagccgaagatgatcgttgccggtttctccgcttactccaag
accctggacttcccgcgcttccgtcagatcgccgacaaggtgggcgcgctgctgttcgtc
gacatggcccacgtggccggtctggtcgctgccggcctgtacccgaacccgctgccttac
gccgacgtggtgaccaccaccacccacaagaccctgcgtggtccacgtggcggcctgatc
ctggccaagtccaacgaagaaatcgagaagaagctcaacgcggcggtattccccggtgcc
cagggtggcccgctgatgcacgtgatcgccggtaaggcggtgtgcttcaaggaagcgctg
gagccaggcttcaaggcctatcagcagcaagtgatcgacaacgcccaggcgatggccggc
gtgtttatcaaacgcggctacgatgtagtgtccggcggtaccgataaccacctgttcctg
gtcagcctgatccgtcagggcctcaccggtaaagaagcagacgcagccctcggtcgcgcc
cacatcactgtgaacaagaacgctgtcccgaacgatccgcagtcgccgttcgtgacctcc
ggcctgcgtatcggcaccccggcggtgaccacgcgcggcttcaaggtgacccagtgcgtc
acgctggccggctggatctgcgacatcctcgacaacctcggcgacgccgatgtcgaggcc
aatgtcgcccagcaggtttcggccctgtgcgcggacttcccggtttatcgctga
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