Pseudomonas izuensis: LAB08_R56350
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Entry
LAB08_R56350 CDS
T08555
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
piz
Pseudomonas izuensis
Pathway
piz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LAB08_R56350 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piz02000
]
LAB08_R56350 (choW)
Transporters [BR:
piz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
LAB08_R56350 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Trp_oprn_chp
DUF3464
Motif
Other DBs
NCBI-ProteinID:
BCX70947
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All DBs
Position
6285541..6286386
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AA seq
281 aa
AA seq
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MLIDQKIPLGQHIASFVEWLTQHGASTFDAIAVTLETMIHGVTFALTWFNPLALIGLIAL
LAHFIQRKWGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVVIGVPLGIVAAHKP
MFYTLMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVP
AELMDAGKAFGCSRRQLLTRIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPV
VNALNTADIALGFEAGLAIVLLAIMLDRICKQPEAKVGGDA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgatcagaaaatccctttaggccagcacatcgcgagctttgtcgagtggttg
acgcaacacggcgccagcaccttcgacgccattgccgtgacgctggaaacgatgatccac
ggcgtgactttcgcgctgacctggttcaacccgctggcactgatcggcctaatcgccctc
ctggcccacttcatccagcgcaaatgggggctgaccgtttttgtcatcgcctccttcctg
ctgatcctcaacctggggtactggcaggaaaccatggagaccctcgcccaagtgttattc
gcgaccctggtctgcgtggtcatcggcgtgccgttgggcatcgtcgcggcgcacaagccg
atgttctacactttaatgcgtccggtactcgatctgatgcagaccgtaccgactttcgtt
tacctcattcctaccctgaccctcttcgggctgggtgtggtgccaggcctgatctccacg
gtcgtgttcgccattgccgcgccaatccgcctgacctacctgggcatccgcgatgtgccc
gcagaattgatggacgccggcaaagccttcggctgttcgcgtcgccaactgcttacaagg
atcgaactgccccacgccatgccgagcatcgcagccggcatcacccagtgcatcatgctg
tcgctgtcgatggtggtgatcgcggcactggtgggcgccgacggactgggtaaaccggtg
gtcaacgcactgaacactgctgatatcgccctgggcttcgaagcgggcctggcgatcgta
ctgctggcgatcatgctcgaccgtatctgcaaacaacccgaagccaaagtagggggtgac
gcatga
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