Pseudomonas izuensis: LAB08_R57240
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Entry
LAB08_R57240 CDS
T08555
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
piz
Pseudomonas izuensis
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
piz03021
]
LAB08_R57240 (rpoH)
Transcription machinery [BR:
piz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LAB08_R57240 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
BCX71036
LinkDB
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Position
complement(6382475..6383329)
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AA seq
284 aa
AA seq
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MTNSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNHNLHEALEVLDDRSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattctttgcagcctgcatatgctctggtcccgggtgcgaacctggaggcctat
gtgcacacggtgaacagcattcctttgctgacgccggagcaggagcgtgaactggccgag
agtctctattatgagcaggatcttgaggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgctcgtagctattccggctacgggctggctcaggctgacctgatc
caggaaggtaacgttggcctgatgaaggctgtgaaacgcttcaacccggaaatgggcgtg
cgtctggtttcgttcgccgtgcactggatcaaggctgaaatccacgaattcatcctgcgt
aactggcggatcgtgaaagtcgcgaccaccaaggcccagcgcaagttgttcttcaacctg
cgcagccagaagaagcgtctggcctggttgaacaacgaggaagtccaccgcgtggcggaa
agccttggcgtagagccgcgggaagtccgcgagatggaaagtcgcctgaccggccacgac
atggctttcgatcctgctgcagaagctgacgacgacagtgctttccagtcgccggccaac
tacctggaagaccaccggtacgacccggcccgtcaactggaagatgccgactggagcgac
aactccaaccacaacctgcatgaagcgctggaagtgctggacgaccgcagccgtgacatc
ctctaccagcgctggctggcggaagaaaaagccacgctgcacgacctggcgcagaagtac
aacgtgtcggccgagcgtattcgccagcttgaaaagagcgcgatgaacaagctcaagttg
tcgatcgccgcataa
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