Pseudomonas izuensis: LAB08_R58680
Help
Entry
LAB08_R58680 CDS
T08555
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00300
Lysine biosynthesis
piz00470
D-Amino acid metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01120
Microbial metabolism in diverse environments
piz01230
Biosynthesis of amino acids
Module
piz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LAB08_R58680 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LAB08_R58680 (lysA)
Enzymes [BR:
piz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LAB08_R58680 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BCX71180
LinkDB
All DBs
Position
6535882..6537129
Genome browser
AA seq
415 aa
AA seq
DB search
MDAFNYRDGELFAEGVALSAIADRFGTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAELGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYVRAAQLPNLEVVGVDCHIGSQLTTLPPFIDALDRLLGLVDRLGDCGIYLRHIDLGGGL
GVRYRDEEPPLAGDYIKAVRERLDGRDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRSTAARAYDIVGPICETGDFLAKERELALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgtgacggtgaactgttcgcggaaggtgttgccctgtctgcc
atcgccgatcgctttggtacaccgacctacgtttactcccgtgcccacatcgaagcccaa
tatctggcttacgccgatgcgctggccggcatgccgcacctggtctgcttcgcggtcaag
gccaactccaacctgggtgtgctgaatgtcctggcgcgcctgggcgccggtttcgacatc
gtgtcccgtggcgaactggaacgcgtattggccgctggcggcagcgccgacaagatcgtg
ttctccggcgtcggcaagacccgtgacgacatgcgtcgcgccctggaagtcggcgtgcac
tgcttcaacgtcgagtcaaccgacgagctggaacgcctgcaagtggtggccgccgagctg
ggtgttcgcgcgccgatctcgctgcgcgtgaacccggacgtcgatgccggcactcaccca
tacatttccaccggtctcaaagagaacaagttcggcatcgccatcgccgacgccgaagac
gtgtatgtgcgtgccgcgcagctgccgaacctggaagtggtcggcgtcgattgccatatc
ggttcgcaactgaccaccctgccacccttcatcgatgcactcgaccgcctgctgggcctg
gtcgatcgcctcggcgattgcggcatctacctgcgtcacatcgacctcggtggcggtttg
ggtgtgcgttatcgcgatgaagaaccgccattggccggcgactacatcaaggccgtgcgc
gagcgtctcgacggtcgtgacctggcactggtattcgaacctggacgcttcatcgtggcc
aacgccggcgtgctgctgacccaggtcgagtacctcaagcacaccgagcacaaagatttc
gccatcgtcgacgcggccatgaacgacctgatccgcccggcgctgtatcaagcctggatg
gacgtcaccgccgtgcgcccgcgcagcaccgctgcccgcgcctacgacatcgtcggcccg
atctgcgagaccggcgacttcctggctaaggagcgtgaactggccctggaagaaggcgac
ctgctggccgtgcattcggccggtgcctacgggtttgtcatgagctccaactacaacacc
cgcggccgcgccgccgaagtgttggtggacggtgatcaggcatttgaagtgcgtcgccgt
gaaacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa
DBGET
integrated database retrieval system