KEGG   Pseudomonas izuensis: LAB08_R58690
Entry
LAB08_R58690      CDS       T08555                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
piz  Pseudomonas izuensis
Pathway
piz00300  Lysine biosynthesis
piz00470  D-Amino acid metabolism
piz01100  Metabolic pathways
piz01110  Biosynthesis of secondary metabolites
piz01120  Microbial metabolism in diverse environments
piz01230  Biosynthesis of amino acids
Module
piz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:piz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LAB08_R58690 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LAB08_R58690 (dapF)
Enzymes [BR:piz01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     LAB08_R58690 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: BCX71181
LinkDB
Position
6537134..6537964
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKLWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRNDGQIGVNM
GAPRLVPADIPFQAPEQALSYQVDVDGTSVELAAVSMGNPHAVLRVSDINNAPVHELGPK
IEHHSRFPARVNVGFLQVIDRGRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcacggcctaggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcacattctgcccaagcacgccaaattgtggggtgatcggcatacc
ggcatcggtttcgatcagttgctgatcgtcgaagcaccgagcaatccggacgtggatttc
cgttatcggatcttcaattccgacggttccgaagtggaacagtgcggtaacggagcacgt
tgtttcgcccgtttcgtgctcgataaacgcctgaccgcaaaacggcagatccgcgtcgaa
accaaaagcggcatcatcgaactggatgtgcgcaacgacgggcagatcggcgtgaacatg
ggcgcaccgcgcctggttccggccgatattccgttccaggcaccggagcaggccctgagt
tatcaggtcgacgtcgacggtacttcggtcgagttggccgccgtgtccatgggcaacccc
cacgccgtactacgagtcagcgatatcaacaatgcaccggtgcatgaactggggccgaaa
atcgaacatcactcgcgcttcccggcgcgggtcaacgtcggttttctccaggtcatcgac
cggggccgcgcgcagttgcgcgtctgggagcgcggagccggggaaacccaggcctgcggt
accggcgcctgtgccgccgcagtggccgcgatcagccaggggtggatggattcgccacta
ttgatcgacctgcctggcgggcgtctgtccattgaatgggcaggcccaggccaaccggtc
atgatgaccggcccggcagtacgcgtatacgaaggacaagtgcgtctttga

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