Pseudomonas izuensis: LAB08_R59340
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Entry
LAB08_R59340 CDS
T08555
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
piz
Pseudomonas izuensis
Pathway
piz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LAB08_R59340 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
piz02044
]
LAB08_R59340 (tssK)
Secretion system [BR:
piz02044
]
Type VI secretion system
Imp/Vas secretion system core components
LAB08_R59340 (tssK)
SSDB
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Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
BCX71246
UniProt:
A0ABM7RZD4
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All DBs
Position
complement(6602552..6603883)
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AA seq
443 aa
AA seq
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MHTHKVIWQEGMLLRPQHLQQNDRYYDHQLKARTQLLGGYTWGFLGLEIDLQFLNMGKVV
INSASGVLPDGSLFEVGGSTRPLALDVPANTGNTSVYLALPLVTGNHVESRRPEQCDVLA
RYITYEMEVADSNAGDGCTSAVSCARPDFRLLLGEEHSDQACVKLKICEVLDTTPDGVIS
LDPDYVATYLQVHSSSFLLSCLKEVISMLGHRGDAIAERIRSTGKVGGAEVGDFMMLQLI
NRTEPLLRHYLTREQVHPQELYCTLLTLLGELATFSSESKRPSPGSRYEHSDQGKSFLKV
MEAIRQVLSMVLEQHAIELPIQTRQYGIMVSPLHDHKLLGSASFVLAASAQCDSEELRHR
LPAHLKVGPVESIRQLVNLHLPGIKVRPLPVAPRQIAFHASKTYFILDLSSEDQAQLERS
GGFAFHVSGEFAELDLKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcatacccataaagtcatttggcaagagggcatgttgctgcgtccgcagcacctccag
caaaacgatcgctattacgaccatcagttgaaagcccgcacccagttattgggcggttac
acctggggttttcttggcctggagatcgatttgcagtttctcaatatgggaaaagtggtt
atcaacagtgcgtcgggagtcctgccggacggcagccttttcgaagtaggaggcagcacc
aggcccttggctctggatgtacctgccaataccggcaacacatccgtctatctagcgttg
ccgttggtgactggcaaccatgtcgaatctcgtcgtccggaacagtgcgacgtgcttgcg
cgttacatcacctatgaaatggaggtcgccgactccaatgcgggggacggttgtaccagc
gcagtcagttgtgcccgtccggacttccgattactgcttggcgaggagcacagcgatcaa
gcctgtgtgaagctgaagatttgcgaagtcctcgacaccactcccgacggcgtgatcagc
ctcgacccggattacgtcgcgacgtacctgcaggtgcattcttccagttttctgctctct
tgtctgaaagaggtcatcagtatgctcggacatcggggcgacgccattgccgagcggatt
cgctctactggcaaagtgggaggggcagaagtaggcgacttcatgatgctgcaattgatc
aaccgcaccgaaccactgttgcgccattacctcaccagggagcaggttcatcctcaggaa
ctgtactgcacgctgctgaccctgttgggagaactggctacattctccagcgaaagcaaa
cgcccgagtccgggcagtcgctacgaacacagtgaccaaggcaaaagtttcctcaaagtc
atggaggcgattcgtcaggtgttgtcgatggttcttgagcagcatgccattgaattgccg
atacagacgcgtcagtacggaatcatggtctcgccattgcacgaccataaattgttgggc
tcggcctcgttcgtgctggccgccagtgctcaatgcgacagcgaagaactgcgccatcga
ttgcccgcacacctcaaggtcggtccagtggagagcatccgtcaactggtcaatcttcat
ttgcccggtatcaaagtcaggccgctaccggttgccccgcgacagatcgcgttccacgcc
agcaaaacctatttcatcctcgacctcagctccgaagatcaggcacaactcgaacgctct
ggcggcttcgcgttccatgtctccggtgaattcgccgagctcgatctgaaattctgggcc
atcaggaactga
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