Pseudomonas izuensis: LAB08_R59390
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Entry
LAB08_R59390 CDS
T08555
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
piz
Pseudomonas izuensis
Pathway
piz02025
Biofilm formation - Pseudomonas aeruginosa
piz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LAB08_R59390 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LAB08_R59390 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
piz02044
]
LAB08_R59390 (tssH)
Secretion system [BR:
piz02044
]
Type VI secretion system
Imp/Vas secretion system core components
LAB08_R59390 (tssH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_22
AAA_16
ClpB_D2-small
AAA_25
NACHT
nSTAND3
TniB
AAA_7
Clp_N
NBD_SMAX1
Sigma54_activat
AAA_24
Hpr_kinase_C
T2SSE
Motif
Other DBs
NCBI-ProteinID:
BCX71251
LinkDB
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Position
complement(6607345..6609942)
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AA seq
865 aa
AA seq
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MINVDLQQLIQTLDAESRRGLESSAERCIARGGSKILVEDFLLALLELPQGLLARALQDA
EIDTGELAAALQLQVKDTASHNPVFAPELLQWLQDALLLATLELGQSVIGQAALILALLR
NPLRYAGSRYQLLLARLNIERLKEFALSRIEPPATGKSLVAGESLLERFTHNLTQQARDG
QLDPVLCRDVAIRQMVDILARRRKNNPIVVGDAGVGKTALVEGLALRIAAGEVPPVLKDV
ELLSLDMGLLQAGASVKGEFERRLKGVIDEVKARPNPVILFIDEAHTLIGAGGNAGGSDA
ANLLKPALARGELRTIAATTWTEYKKYFEKDPALARRFQPVQLREPTINEAVTILRGLAP
VYEKSHGIYLRDDAVVAAAELSARYLTGRQLPDKAVDVLDTACARVRISLAAAPESLERL
RGELAEGDRQRQALCRDTEAGLPIDRDTLAALQEHLVLVENKKAELELLWTQQRKLAERL
LELRQQLAKARGAAIAEPGEHASGIEVLETALNETHRVLTDTQVKQRLVSFEVCPRLVAE
VISAWTGVPLAQLAREHNIKVTSFAANLRNRVRGQEQAIQALDRSMRATAAGLNKPDAPV
GVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQEKHTVSRLIGAPPGYVGYGE
GGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGVANDGEGRQIDFRNTLILMTS
NLGSERISELCESVAQPSMEDLEAAIRPILIKHFKPALLARMRIVPFYPVSGPVLLELIE
VKLGRLRERLLRRQLDFSYSQNLVDHLAGLCAKSDSGARLIDQLLDLHVLPQVADRLLDA
MASGEHFTRVHATLDGDACVICEFA
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatgtggacctgcaacaacttatccagacgctggacgccgaaagccgtcgtggt
ctggaaagttcagccgagcgctgcatcgcccgtggcggcagcaagatcctcgtcgaggat
tttcttttggcattgttggagctccctcaaggtttgctcgctcgtgcgctgcaagatgcc
gaaatagataccggagaactggcggctgcgttgcaattgcaagtcaaggacaccgcctca
cacaatccggtgttcgctccggaactgttgcaatggctgcaggacgccttgctgttggcg
accctcgagttgggtcagagtgtgattgggcaagccgcgttgatcctcgcgttgctgcgt
aatccgttgcgctacgccggtagtcgataccagttgctgcttgccagactgaacatcgag
cgactgaaagagtttgcgttgtcccggatagaaccgccggccaccggcaagtctctggta
gcaggtgagtcgctgctggagcgcttcactcacaacctgactcaacaggcccgtgacggc
caactggacccggtgttgtgccgtgacgtggcgatccggcagatggtcgacatccttgcc
cgtcgccgcaagaacaatccgattgtggttggtgacgcgggcgtcgggaaaacagccctt
gtcgaagggttggccttgcgcatcgctgccggtgaagtaccgccagtgctcaaagatgta
gagcttttgtctctggacatggggctattgcaggccggtgcgagcgtcaaaggtgaattc
gagcggcgcctcaaaggcgtgatcgacgaggtcaaggctaggccgaatccagtgatcctg
ttcatcgatgaagcccatacgctgattggcgcgggaggcaatgccggtggttccgatgcg
gccaatctgctcaagccggcattggcccgtggcgaattgcgaacgatcgccgccacgacc
tggacggagtacaagaaatactttgaaaaagacccggcattagcccggcgctttcaacct
gtgcaattgcgtgagccaaccatcaacgaagcggtgactattcttcgcgggctagctcca
gtgtacgagaagagccacggcatttacctgcgtgatgatgctgtggtggcagctgccgag
ttgtctgctcgctacctgacaggtcgtcagctgccggacaaggccgttgatgtcctcgac
acggcatgtgcccgtgtgcgtatcagcctggccgcggcgccggaaagtctggagcgtttg
cgaggtgaactggctgagggtgaccgccagcgccaggcgttgtgtcgggatactgaagcc
ggattaccgattgatcgcgatacgctggccgccttgcaagagcatcttgtcttggtggag
aacaaaaaggccgaactggaactcctgtggacacaacaaaggaaactggcagaacggctg
ctggagctgcgtcagcaactggccaaggcccggggagcggccatcgctgaacccggggag
cacgcttctggtatcgaagttctggaaaccgcactcaatgaaacccatcgcgtcttgacc
gatacgcaagtcaagcaacgtctggtgagctttgaagtgtgcccgcgcctggtggccgaa
gtgatcagcgcatggacgggtgtaccgttggcgcaattggcccgtgagcacaatattaag
gtcaccagttttgccgccaatctgcgcaatcgtgtccgtggtcaggaacaagccattcag
gcactggatcgctcgatgcgcgcaacggccgccggcctcaacaaacctgatgcgccggtt
ggtgtgtttctgctagtcggccctagcggcgtcggcaagaccgaaaccgcgctggcctta
gcggatttgctgtacggcggtgatcgtttcatcaccacaatcaatatgtcggagttccag
gaaaagcataccgtttcgcgtttgatcggtgcgccacctggttatgtcggttacggcgag
ggcggcatgctcactgaagccgtacgtcagaagccttactccgtcgtgttgcttgatgag
gtcgagaaggctgacccggacgtactcaacctcttctaccaaatcttcgacaagggcgtg
gccaacgatggggaagggcgccagatcgattttcgcaacacgctcattttgatgacctcc
aatctggggagcgagcggataagcgaactgtgcgaaagcgttgcgcagccatctatggag
gatcttgaagcggccattcgcccgatcctcatcaaacacttcaaaccggcattgttggcg
cgtatgcgcatcgtgccgttttacccggtcagtggccccgttctactcgagctgatcgag
gtcaaacttggccgtttgagagagcgcctgctccgacgtcagctggacttcagctacagc
caaaacctcgtcgatcacttggccgggctctgcgctaaaagcgatagcggtgcccgtctg
attgaccaattactggatctgcatgtgttgccccaggtggctgaccgattgcttgacgcg
atggcgtctggtgagcacttcacacgcgttcatgcgacgctggatggcgacgcctgtgtc
atctgcgagttcgcttga
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