Pseudomonas izuensis: LAB08_R59910
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Entry
LAB08_R59910 CDS
T08555
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
piz
Pseudomonas izuensis
Pathway
piz03420
Nucleotide excision repair
piz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAB08_R59910 (uvrD)
03430 Mismatch repair
LAB08_R59910 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piz03400
]
LAB08_R59910 (uvrD)
Enzymes [BR:
piz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAB08_R59910 (uvrD)
DNA repair and recombination proteins [BR:
piz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAB08_R59910 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LAB08_R59910 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BCX71303
UniProt:
A0ABM7S215
LinkDB
All DBs
Position
6672155..6674338
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACLRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAETIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLEGRGNDAALERVINVPARGI
GEKTVEAIRDHARHSDVSMWEAMRQLVANKGLTGRAAGALGAFIELIENLAAKCMEMPLH
LMTQTVIEQSGLIAYHQAEKGEKGQARVENLEELVSAARNFENTEEDEDLTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGVTRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGNQ
SMSGSNLFSGSEIPQTGFSLGQAVRHSVFGEGVILNFEGAGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggctgta
gcagcctccgtgggtcgtcagttggtcctggccggagctggttccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcgtcgccccactccatcctg
tcggtgacgttcaccaacaaggcggctgccgaaatgcgccatcgcatcgagcagctgatg
ggtatcaacccggccggcatgtgggtcggcaccttccacggcctggcgcaccgcttgttg
cgggcgcactggcaggaagccgggctgagccagaccttccagattctcgacagcgatgac
cagcaacggctggtcaagcgggtgatccgcgagctgggcctggacgaacaacgctggccg
gcccgccaggcccagtggttcatcaacgggcagaaagacgaaggtctgcgcccgcaacac
attcaagccagcggcgatctgtttctggcgaccatgcgcagcatctatgaagcctacgag
gccgcctgcctgcgcgccggcgtcatcgatttctccgaattgctgctacgcgccctcgac
ctgtggcgcgatcatccaggactactggcgcattatcagaaacgtttccggcacattctg
gtggacgagttccaggacaccaacgccgtgcagtacgcgtggttacgcctgctggccaag
ggtggcgacagcctgatggtggtgggcgatgacgatcagtcgatctacggctggcgtggc
gcaaaaatcgagaacatctaccagtattccgaagacttcccggatgccgaaaccattcgc
ctggagcagaactatcgctccaccgcgggcatcctcaaggccgccaacgccttgatcgcc
aacaacaccgggcgcttgggcaaggagctgtggaccgatggcggcgaaggcgaagcgatc
aacctgtacgctgcgttcaacgaacacgacgaagcccgctacgttgtcgaaaccattgaa
agcgcgctgaaaaccggcctggctcgtagcgatattgcgattctgtatcgctccaacgcc
caatcgcgcgttttggaagaagccttgttgcgtgagcgcattccgtaccgcatctatggc
ggtcagcgcttcttcgaacgggcagaaatcaagaacgccatggcttatatgcgtttgctt
gaaggccgtggcaacgatgccgcgctggaacgggtgatcaacgtacccgcccgcggcatc
ggcgaaaaaaccgttgaggcgattcgtgaccatgcgcgccacagcgatgtgtcgatgtgg
gaagcgatgcgccaactggtggccaacaagggcctgaccggtcgcgcggccggtgcactc
ggcgcattcatcgaactgatcgagaacctcgcggccaagtgcatggaaatgccgctgcac
ctgatgacccagacggtcatcgagcagtcagggcttattgcctaccaccaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcgcgcaac
ttcgaaaacactgaagaagacgaggacttgacgccattggcggcgttcctcggtcacgcg
tcgctggaggctggggatacccaggccgacgaacacgaagacagcattcagctgatgacc
ctgcacagcgccaaaggcctggaattcccttatgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaacccggacgccttgaggaagagcgtcgtctg
gcttatgtcggcgtcacccgtgccatgcaaaacctggtgatgacctatgctgaaacccga
cgcctgtacggcagcgagacctacaacaaggtgtcgcgcttcgtacgcgaagtgccgaaa
ggtctgatccaggaagtgcggctttccaacagcgtcagtcgtccgttcggtggcaaccag
tcgatgagtggcagcaacctattcagcggcagcgaaatcccgcagaccggtttcagtctc
ggtcaggcggtacggcattcggtgtttggcgagggtgtgatcctgaacttcgaaggcgcc
ggcgcacaggcgcgggttcaggtgaacttcagcgaaggcagcaagtggttgatgctgggg
tatgcgaagctggaagcgatctaa
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