Pseudomonas izuensis: LAB08_R60240
Help
Entry
LAB08_R60240 CDS
T08555
Name
(GenBank) DeoR family transcriptional regulator
Organism
piz
Pseudomonas izuensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
MarR
HTH_Mga
HTH_5
FeoC
HTH_20
Rrf2
Put_DNA-bind_N
HTH_36
HTH_Crp_2
EAP30
CggR_N
MarR_2
HTH_AsnC-type
FokI_D3
HTH_12
TrmB
HTH_IclR
TFIIE_alpha
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BCX71333
LinkDB
All DBs
Position
complement(6713275..6714051)
Genome browser
AA seq
258 aa
AA seq
DB search
MSKRNTPQRRHNILALLNEQGEVSVDELAKHFETSEVTIRKDLAALESNGLLLRRYGGAI
TMPQELVADLGQPVSKYKQAIARAAVTRIREHARIIIDSGSTTAAMIPELGQQPGLVVMT
NSLNVANALNELEHEPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLVR
GTTTFNELLGLSRVMAEVAREVVVMVEADKIGRKIPNLELPWSSVHTLITDDRLPLEARD
QIQARGINLICAAVNQEK
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgcaacacacctcaacgccgccacaacatcctggccttgctcaacgagcaa
ggcgaagtcagtgtggacgaactggccaagcacttcgaaacctcggaagttacgattcgc
aaggatctggcggcactcgaaagcaacggcctgctgctacgtcgttatggcggtgcgatc
accatgcctcaggaactggtggcggatctcggtcagccggtttccaaatacaagcaagcc
atcgcccgcgctgcggtgacgcggattcgcgagcacgcgcgcatcatcatcgacagcggc
agcaccacagcggcgatgattcccgagctcggtcaacaaccgggtctggtggtgatgacc
aattccctgaacgttgccaatgccttgaacgagctcgagcacgaaccggtgttgctgatg
accggcggcacctgggaccctcactccgagtcctttcaggggcaggtggccgagcaggta
ttgcgctcttacgatttcgaccagttgttcatcggcgccgatggtatcgacctggttcgc
ggtactactacctttaatgagttgctcggattgagccgagtcatggccgaagtcgcccgt
gaagtggtggtgatggtcgaggccgacaagatcggtcgcaagattcccaacctggaactg
ccttggagcagcgtccataccctaattaccgatgatcgcctgccacttgaggcacgggat
cagattcaggcccgcggcatcaatttgatatgcgcggcagtcaatcaggagaaatag
DBGET
integrated database retrieval system
