Penaeus japonicus (kuruma prawn): 122242388
Help
Entry
122242388 CDS
T07703
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122242388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122242388
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122242388
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122242388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
122242388
NCBI-ProteinID:
XP_042855614
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MLPVCAPYVNEPVQNVNKQVHVEAAACEYLSVVHANFNTELRTYNRLNLYRECSFHLCLT
TNENMEIQLACELPRVQNMVHVQGSAKPRLVTPGEVIYQDTSFMRGHGTYMEEGVQVASV
AGYVTRVNRLITVTPLRQVYQGAVGDTIVGRITQVQTNRWKVDVNSRLDAELRLSNIQLP
GGEQRRSNLEDERGMRGLLREGDLVCVEVQKISDDGLLRLAARSIKYGKLSQGTLLAVSP
SLIVQDKQRMHDLPCGARVVFGANGYVYITPTVPQEQASTYTVNFEEVPVDIRKTIGRLR
NCIKLLAIHSIMISPTSVTSAFDISVEQEYEIKDLLKPDVMQDVAMATVQMLNE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcttccagtgtgcgcgccatatgtgaacgaaccggtacagaatgtaaacaaacaagta
catgtggaagcggctgcgtgcgaatacctctccgttgtacatgctaattttaatactgaa
ttgagaacttataatcgcttgaatttatatagggagtgttcttttcatctgtgtctgaca
acaaacgaaaacatggagatccagcttgcgtgtgaacttccccgagtccagaatatggtt
catgttcagggctcggctaagccaagacttgtcaccccaggagaagtgatatatcaagat
acaagttttatgaggggtcatggtacatacatggaagaaggagtccaagttgcatcagtt
gcaggttatgtgaccagagttaatcgactcatcactgtcactccattacgtcaagtgtat
caaggtgctgtcggtgataccatcgtgggacgtataacacaggtccagactaacagatgg
aaggtagatgtcaattccagacttgatgctgagcttcggctgtccaacattcagttgcca
ggaggagagcaacgacgcagcaatttggaggatgaacgtggtatgagaggtttgctgcgt
gagggagaccttgtctgtgttgaagttcagaagattagtgatgatggactgttaagattg
gctgctcgtagcatcaaatatggaaagctatcacaaggaacactcctagcagtgtcacca
tctcttattgtccaagacaagcagagaatgcatgaccttccttgtggtgcccgggttgtg
ttcggagccaatggatatgtgtacattactccaacagtgccacaagaacaagcatcaact
tacactgtcaactttgaagaggtccctgtagatattcgtaaaacaattggacgtctccgc
aactgcatcaagctcttagcaatacattccatcatgatctctccaacaagtgttacatct
gcttttgatatatctgttgaacaggaatatgagatcaaggatttgctaaagccagatgtt
atgcaggatgttgctatggcaacagttcagatgctgaatgagtag
DBGET
integrated database retrieval system
