Penaeus japonicus (kuruma prawn): 122242548
Help
Entry
122242548 CDS
T07703
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122242548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pja03041
]
122242548
Spliceosome [BR:
pja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122242548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
PRP4
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_SCAP
Nbas_N
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
122242548
NCBI-ProteinID:
XP_042855774
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MSEGENSPVPLSGGPPGGERRWYGSLEASMGGSESPADSPGSPAASTNIHTSNEYMELDE
PEILDEKKALLEEFERKRRARMIHVTTDDSEVKQQLRQLGEPICLFGEGPADRRNRLKEL
LSRLGEDALKKTVAGTQDAEMPEQEQQRPEETWYHEGPQTLKEARTFILEYSIPRARARL
KKEHLDNEIPEATRTARRQEVQNKLRSFSLLGSQNADSRPISYCSFSPNGKLLATSSWSG
LCKLWKVPDCQEEQMMSGHNCYVDCIEWHPSATLSMEPNALNLVSSGRDGTVQLWNMCGE
ALGELPRLEARVSRVVFHPSGRFLGACVHDNSWRLWDLEIQEEVLFQEGHSKPVFCLDFQ
GDGSLAATGGMDAFGRVWDLRIGRCVMFLTGHQNAILGINWSPDGYHLVSGSEDNTARIW
DVRARRCIYSIPAHTGIVTGARYDKIGGQYIVTSSYDGSVRLWCHGSFQPMRALEGHGQK
VMGVDISPTDGIIATCAFDRTFKLWGPD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagggcgagaactcccctgtgcccctgagtggagggccacctgggggggagagg
aggtggtatgggtccttggaggcatccatggggggcagcgagtctccagccgactcgcca
ggaagcccagcagcctccacaaacatccacacaagcaatgaatacatggaacttgacgag
ccagaaattttagatgaaaagaaggctctgctggaggagtttgagaggaagagacgtgcg
cgcatgattcatgtcaccacagatgacagtgaggtgaagcagcagctccgccagctaggc
gagccaatctgcctgtttggggaggggccagcagaccggaggaacagactcaaggagctg
ttgtctcgcctaggagaggatgccttgaagaagactgtggcagggacacaagatgccgaa
atgcctgagcaagagcagcagcgtccagaggagacgtggtaccacgaaggtcctcagacg
ctgaaggaggctcgaacgtttattcttgaatattccattccccgtgcaagagcaagactg
aagaaggaacacctggacaatgagattcccgaggccactcgcacagccaggagacaagaa
gtgcagaacaaattgcgctctttcagtcttcttggaagccagaatgcagactcgagaccc
atctcttattgtagttttagtcctaatggcaaactccttgcaacctcttcatggagtggg
ctttgtaaactatggaaagttccagactgccaggaagaacaaatgatgtcagggcataat
tgctacgtagactgtatagagtggcatcccagtgctacactttcaatggaaccaaatgca
ctgaacttggtatcaagtggtcgtgacggtactgtccagctgtggaatatgtgtggagag
gcacttggggaactaccacgtcttgaagcaagggtgtctagggtagtcttccaccctagt
gggaggttccttggggcttgcgttcatgacaacagctggcgtttgtgggaccttgaaatt
caggaggaggtgctcttccaagaaggccattccaagcccgtcttctgcctcgacttccag
ggagacggatcccttgcagcaacaggagggatggatgcattcggtcgtgtctgggatctc
agaatcggcagatgcgtcatgtttctgactggacatcagaatgctatattaggcatcaac
tggtctcccgatggttatcatcttgttagtggaagtgaggataatactgccagaatttgg
gatgtcagagcaaggcgctgcatttacagcataccagcacacaccgggatagtcacagga
gctcgttacgataaaataggaggccagtacattgtcactagttcatatgatggttcggtt
cgcttatggtgccatggatccttccagccgatgcgtgcactggaaggccatggccagaag
gtcatgggagtggatatttcaccaacagatggaatcatcgccacgtgtgcctttgatcgg
acgttcaaattgtgggggccagattaa
DBGET
integrated database retrieval system
