Penaeus japonicus (kuruma prawn): 122242779
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Entry
122242779 CDS
T07703
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pja03041
]
122242779
03016 Transfer RNA biogenesis [BR:
pja03016
]
122242779
Enzymes [BR:
pja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122242779
Spliceosome [BR:
pja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122242779
Transfer RNA biogenesis [BR:
pja03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
122242779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
122242779
NCBI-ProteinID:
XP_042856107
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MAAFEEMGVMSEIAKAVEEMDWTLPTDVQNEAVPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWEALKDIQQGKTSKVNKEVSPNWLMSFFDRDAGMAVTPDGLRCQSRDPKAWQGVRC
TKGVAGKGKYYYEATVSDEGLCRVGWATPQAALDLGTCKAGFGFGGTGKKSNCRQFDDFG
EPFGLKDVIGCYLDLDAMEIRYSKNGADLGKAFTLRSEFKNSTFLPAVVLKNAEMSFNFG
ATEFKHPPKGGFVAICQAPKDCTVTSGVRGGDRPQKVENNAPQAIIIEPSRELAEQTLTQ
LKMFRKHLDNPVVRDLLVVGGIPVKDQIAALNSGIDIVCGTPGRLEDLINTGQLSLQSCK
FFVLDEADGLLKQGHERLINNIYNSIPKITSDGKRLQMIVCSATLHSFEVKRMAERLMHF
PTWVDLKGEDAVPETVHHVVVTVDPRADTSWTTFRRHVPTDGVHQKDNVRPGNNTPETLS
EAVKMLKGEYCLKAIDTHKMDKALIFCRTKLDCDNLERYFNQIGGGPKNPANPYSCVCLH
GDRKPNERKANLETFKSGRVRFLICTDVAARGIDVNGLPFIINVTLPDEKSNYVHRIGRV
GRAERMGLAISIVAAVPEKVWYHGEWCPTRGRNCYNTRLTTEKGCCTWYNEPQYLADIEE
HLGVTIQQVDNEMKVPVDEFDGKVVYGEKRAAAGSNYQTHVEQLAPAVKELAELERQTQV
IYLKRQYGKEYPWTR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttttgaagagatgggtgtaatgtcggagatagcaaaagctgtcgaggagatg
gactggacgctcccaaccgatgtgcagaacgaagccgtgccactcatcctaggcggtggg
gatgtgctgatggccgcagagacgggcagcggcaagacgggtgccttctgcctgcccatc
ctgcagattgtgtgggaggcactcaaggacatccagcagggcaagacgtccaaggtcaac
aaagaagtctctcccaactggctgatgagcttctttgaccgtgatgctggcatggcagtg
acccctgacggcctacggtgccagtcccgtgaccctaaggcctggcaaggtgtccgctgc
accaagggggtcgctggcaagggcaagtactactatgaggcgaccgtatctgatgagggg
ctttgccgcgttggatgggcaacgccacaggctgccctggacctgggcacatgcaaggca
ggttttggcttcggtggtacaggcaagaagtccaactgccgccagttcgatgacttcggt
gaaccttttggtctgaaagatgtgattggctgctacctggacctggatgcaatggagatc
cgttacagcaaaaacggggcggaccttggaaaggccttcaccctccgcagcgagttcaag
aactccaccttcctcccagctgttgtgctcaagaatgctgagatgtccttcaactttgga
gcaaccgaattcaagcaccctccaaagggtggctttgtggccatttgccaggctcccaag
gactgcacagtgacctctggtgtacggggcggagataggccgcagaaggtggaaaataat
gctcctcaagccattattattgagccttctcgggaattggctgagcagacactcacgcag
ctcaaaatgttccgcaaacatctggacaatccagtggtgcgtgacttgctggttgtaggt
ggcattccagtgaaggaccagattgcagcacttaactcaggcattgacattgtgtgtggc
actcctggacgactggaggatctcatcaacactggacagctctcactccagtcgtgcaag
ttctttgtactggatgaagctgatggtcttctgaagcagggacacgaacggctcatcaat
aacatctacaactccattcctaaaatcacgtccgatggaaagaggctccagatgattgtc
tgttctgccacactgcattcctttgaggtcaaacgtatggctgaacgcctgatgcacttc
ccaacatgggttgaccttaagggagaagatgcagttcccgagactgtccaccacgttgta
gttacggttgacccacgtgcagacaccagctggaccaccttccgacgccacgtccccacc
gatggagtccaccagaaggacaacgtgcggccagggaacaatacgccagaaaccctcagc
gaagccgtgaagatgctgaagggggaatactgtctcaaagccatcgacacccacaagatg
gacaaggcgctgatcttctgccgcacaaagctagactgtgataacctagaacgctatttc
aatcagattggtggagggcccaagaatccagccaatccctactcatgtgtgtgcctccac
ggtgatcgtaagccaaatgagcgcaaggctaatctcgaaacctttaagagtgggcgagtg
aggttcctcatctgtactgacgttgctgcgcgcggtattgatgtcaacggactgcccttc
atcatcaacgtgactctgccagatgagaagagcaactatgtgcaccgcattggtcgtgtc
ggccgagcagagaggatgggtctggccatctccatcgttgcggccgtaccagagaaggtg
tggtaccacggcgaatggtgtccaacgaggggacgtaattgctacaacacacgcttaacg
acagaaaaaggatgctgtacgtggtataacgagccccagtacttggctgacattgaggaa
cacttgggagtcacgatccagcaggtggacaatgagatgaaggttccggtggacgaattc
gacggcaaggttgtgtacggcgagaagagggcagctgccggttcaaactaccagacccac
gtggaacaactcgcccctgctgtcaaggaactagcggaacttgagagacaaacgcaagtc
atttacctcaaacgtcagtacggaaaggagtacccgtggacacgataa
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