Penaeus japonicus (kuruma prawn): 122243029
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Entry
122243029 CDS
T07703
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03030
DNA replication
pja03410
Base excision repair
pja03420
Nucleotide excision repair
pja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122243029
03410 Base excision repair
122243029
03420 Nucleotide excision repair
122243029
03430 Mismatch repair
122243029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pja03032
]
122243029
03036 Chromosome and associated proteins [BR:
pja03036
]
122243029
03400 DNA repair and recombination proteins [BR:
pja03400
]
122243029
DNA replication proteins [BR:
pja03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122243029
DNA Replication Termination Factors
ELG1-RFC complex
122243029
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122243029
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122243029
Check point factors
HRAD17(Rad24)-RFC complex
122243029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_24
AAA_assoc_2
AAA_30
AAA_22
AAA_16
AAA_11
Mg_chelatase
AAA_19
DUF815
ResIII
RuvB_N
AAA_14
SLFN-g3_helicase
Gp44_lid
AAA_5
AAA_7
bpMoxR
AAA_18
DNAX_ATPase_lid
AAA_3
HdcB
VipD-like_C
Kinesin
Motif
Other DBs
NCBI-GeneID:
122243029
NCBI-ProteinID:
XP_042856424
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MHAFLKTGKLATGGGQAGPSKEKVVKKKAPVPWVEKYRPKTVEEVAYQDEVVSVLKSTLQ
GADLPNLLFYGPPGTGKTSTILAASRQLFGDLFRQRVLELNASDERGIQVIREKVKSFAQ
TTVSSTRPDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKQSKTTRFCLICNYVSRIIE
PLTSRCSKFRFKPLAQGILLKRLTFICEEENVKYEDAVLETLIGTSEGDLRRAITTLQSA
ARLRSGEQISKEDIYEITGVVPDKWLTELLEVCASNSYEKLSDFVNIMMAEGYSATQVLN
QIHDVLMNNNQLGDIQKATVYERLAVCDHRLIDGGDEYLQVMDLSCTIMKQMCN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcatgctttcttgaagaccggtaagcttgcaacaggaggcgggcaggcaggaccaagc
aaagagaaagtggtcaagaagaaagccccagtgccatgggttgaaaaataccgaccaaaa
acggtggaagaagttgcatatcaagatgaggttgtgtctgtcttgaaaagcaccttgcaa
ggagctgatctgccaaatttgttgttctatggtcctccaggtacgggtaaaacttcaaca
atcttagctgcttcgagacagctgtttggcgatctcttccggcaaagagtattagagcta
aatgcctcagatgagagaggtattcaggttattagagagaaggtgaagagttttgcccag
accacagtatctagcacaagacctgatggcaaaccatgtccaccgttcaagatcattatc
cttgatgaggccgactccatgactaatgcagctcaagcagccctcaggcggacaatggag
aaacagtccaagacgacaagattctgtctcatctgtaattatgtgtcacgtattattgag
cctctgacctccaggtgctccaagtttagatttaaacccctagctcaaggcatccttctt
aaaagacttaccttcatctgtgaagaggagaatgttaagtatgaagatgcagttttggaa
acattaattggtacaagtgaaggtgatttacgaagagctatcactaccctccagtcagct
gcaagactgaggtcgggcgagcaaatatcaaaagaagatatttatgaaataacaggagtt
gtcccggacaagtggctgacagagttattagaagtgtgtgcctcaaactcatacgagaag
ctgagtgactttgtaaacattatgatggctgaaggctactctgctacacaggtcctcaac
caaatacacgatgtactcatgaacaacaatcaactgggtgacattcagaaagctacagtt
tacgagaggctggcggtgtgtgaccatagactcattgatggaggagatgaatacctgcaa
gtgatggacctttcttgcacaattatgaaacagatgtgcaactga
DBGET
integrated database retrieval system
