Penaeus japonicus (kuruma prawn): 122243213
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Entry
122243213 CDS
T07703
Name
(RefSeq) uncharacterized protein LOC122243213
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122243213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pja04121
]
122243213
03400 DNA repair and recombination proteins [BR:
pja03400
]
122243213
Ubiquitin system [BR:
pja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
122243213
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122243213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
SAP
PASTA
Motif
Other DBs
NCBI-GeneID:
122243213
NCBI-ProteinID:
XP_042856644
LinkDB
All DBs
Position
Unknown
AA seq
1736 aa
AA seq
DB search
MSDSRGGRLSRKRKKEDSMTFSSIHDITDDFQEAATVFRVPKKAKTEKPQPAPRQRGRPK
KGNTVRPNSQTAKKTSGPGPRTEGPSQEILEIEIDEAEVDSEPKIKELEKDTEAKQLPED
EELLELEQSVCSESEKLCPCCKHIVPAALLGDHFKECMQKFQLVKRRSERNASSSKLKPK
EGDFEDDDLEEGPVFSKSKERSLRDRLPQQDVKEKAKTSTKTGEAKNRREAKKTTKQAKN
DPDLAMALALSRSMVEDEAEQRASREEKLLELGLDNIVDEDRKAQPLLLPLSSATGKSQP
SKGPGKGKGKKRNAVWRNAVLVNRSKEERENIISEKVAALLAAEDTQRNEWKEPGNGCRK
GALLRFKDKSCSLWEAAHSHSDQPLSDFYVPDLEPYIEPKKVAVGGLLRRLSQIPGRLNL
TAIDENSDSDSDGEGDRNYAVDRDSTQSVLAELLGSQECLDITRAHNAIKAEDLSKYQDF
EDPVADPNVTLEAASGFWVLRLPGEGSEDNIEGDRDTSEVKDEKDIDLVKKDSSEGIMVT
ESACESDGYHDDKSEGDYLRENQAEEGCSLSSETMITEDVGEDNLQKSKGVSSSTIDLVS
DNASSEPFLINDSLGRSESDKLIATICDSATEDDASHKTSKNTVLEGVRSEKDGEHVSRN
DNDLEHCESDGSEDCEISIILDTSSRMGECNRDKLCKSHPEGEMSNISPEPKESPRELQL
KDLIAAEGVQEKDSESSMNSDETQIFFEDQECNLNASIRQRLHTDETILYTDATDLSSVL
GREMGCQEKKEESHYLNIEEERRVSDSYEIRDQTGALMKTKGFSNRQARERDTEENKDEK
GERECKEKYSDKSPELKIEDPLHAKLIYDWASLLASGEGADVTITTSEGSDLQAHSFVIL
VRCPKFYQEVQSLEKKVTWMDICFEGAYIFLSYIYTATCKIKAKDDSLWMDVFDLALKYE
CEDLVTYLESLYKANPTPIKVVTPTSSKDDIVKTDINMLTPKMVNSKSVGIIEKRVRRCI
DLSPETKRPVSIDVVIEDPKRDSLAQPIYSPELVVMSSDPEKDGEKCSSQSPDLFNESCL
NENQSGRTFPSSSPPGLSELQQSPCNKSIQDEEADLSLGMESKTSKLNSSGRSSDFFRND
DLDELSSDFPDFNKMKQVADAGNLEQSRTSRCNEEIKQTDTNNCPEEEEEEEEEEEEEEE
EEGETDVIDLTVCSSGSSKSVGADNLIISSVHDNPPNTESETEDMEPLKLADGTDTNSEN
NEEPPLEPCIAVVNIMQATPTKSCDANYDQQEESMNRSYISNVWDDFDDIGCGMLPIEVS
PVTPVKAVGTSADEIHNQDNEFHLSHVSDSFSQSKGKSTIKTVEEKTSAVVQNRKNTSVG
HSLSKTSDSDGRKDRSISNIGSGQGNSAADIVVASGSSFSDDTLLRVAEEFEDCNLWMDD
FDSVDDVSNSLPKRDMGPKSPKSKKDLLKTPNVKIGLSKKSITPMPDYKRMSSPDLKKEL
EKYGIRPISRRKATLLLQHVYEQTHPLVTDSEAESSFCETPQRQPPEKSKKNISSLHEKV
LAKKTLQPKNKKARPNTKRKGAGSQPLPNIPENQREDQGEEDERDLLNSSQTSNTSTDGS
EFDCAEESLMVGAGDDEDAFTATQQVDIGSKVAKFIKCDPELYEKILLYEPIFVEDLQAS
LKANGIKTSMNNLLEILDEQCITFRTQQGQRNRSRKRKSPKKKNIGSPTKSPKKNS
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagtagaggaggccgcctgtctcgaaagagaaagaaagaagattccatgaca
ttttccagcatacatgatatcactgacgacttccaggaagctgccactgtgttcagagtt
ccaaagaaagcaaagactgaaaagcctcaacctgccccaaggcaaagaggccgtcccaag
aaaggtaacacggtaaggccgaactcgcagacagctaaaaagacgagtggacccggcccg
agaacggagggtccaagtcaggagatcttggagattgagattgatgaggctgaggttgat
agtgaacctaaaatcaaagaactggaaaaggatactgaagcaaagcaacttccagaagat
gaagagctcctggaattagaacagtcagtgtgctctgaatcagaaaagctgtgtccttgt
tgtaaacacattgttcccgctgcccttttaggcgaccactttaaggagtgcatgcaaaaa
ttccaactggtgaaaaggagatctgagagaaatgcatcatcatcaaaattaaagcctaaa
gagggagactttgaagatgatgatttggaggaaggtccagttttttcaaagtccaaggaa
aggagcctccgagatcgtctcccacagcaagatgtgaaggaaaaggctaagacctcaaca
aaaactggggaggccaaaaacaggcgtgaggctaaaaagacgactaaacaggccaagaat
gaccctgatctggctatggcactggctctctcccgctcaatggttgaagacgaagcagag
cagagggcgtcaagggaagaaaaactcttagaattaggattagataatattgtagatgaa
gatagaaaggcacagcctcttttgttgcctctttcatcagctacaggaaaaagtcagcca
tccaaaggtccaggtaaaggaaaaggcaaaaagcgcaacgctgtttggcgtaatgctgtc
cttgtaaatcgctccaaagaggaaagagaaaatatcattagtgaaaaggtggccgcactc
ttagccgctgaagacacacagagaaatgaatggaaggaaccggggaatggctgtaggaaa
ggagctctgttaagatttaaagacaagagttgcagcctttgggaagcagctcatagtcac
agtgaccagccgttgagtgatttttatgtgcctgatctagagccttacatagagcctaaa
aaggttgctgttggaggcttactgagaagactctcgcaaattccaggtcgattgaatctg
actgctattgatgagaactcagattcagactctgatggagagggagatagaaactatgcc
gtggaccgagattctacacaatctgtcctggcagaactccttggatcccaagagtgccta
gacataacacgtgcacataatgccattaaggccgaagatttatcaaaatatcaagacttt
gaagatcctgtagcagacccaaatgttactttggaagctgctagtgggttctgggtcctg
aggctaccaggtgaaggttctgaagataatattgaaggagacagggacaccagtgaagta
aaggatgagaaagacattgatcttgtcaaaaaggactccagtgaaggaataatggtgact
gagagtgcatgtgagagtgatggttatcatgatgataaaagtgagggtgactatttgagg
gagaaccaagcagaggaaggttgttctttatcatcagaaaccatgattactgaggatgtg
ggagaagataatctgcagaaaagcaagggagtgtctagcagtactattgatttagtcagt
gataatgcatcttctgaaccttttctaataaatgattctttaggaagaagtgaaagtgat
aagcttatagccacaatatgtgatagtgcaacagaggatgatgcctctcataaaacttca
aagaatacagtgctagagggtgttagatctgaaaaagatggtgagcatgtatcaagaaat
gataatgatttagaacactgtgagagtgatggaagtgaggattgtgaaatttcaattatt
ttagatactagctctagaatgggtgagtgcaatagggacaaattatgtaaatctcatcca
gagggtgaaatgagtaatattagtcctgaacctaaagagtctccaagagaactacaactg
aaggatttgattgctgctgaaggtgtccaagagaaagactccgagtctagtatgaattct
gatgagacacagatattttttgaagaccaagaatgtaaccttaatgcaagtataagacag
cgcctgcacacagatgaaacaatcctttatacagatgcaactgacctttcttcagtacta
ggtagagaaatgggttgccaggagaaaaaagaggaatcacattatttgaatatagaagaa
gaaaggagagtgagtgacagttatgagattagagaccaaactggagccttgatgaaaacc
aaagggttctccaatagacaggccagggaaagggacacagaagaaaataaagatgaaaag
ggagaaagagagtgtaaggaaaagtattctgacaagtcaccagaactgaagattgaggac
ccccttcatgctaagcttatttatgactgggcttcattattagcaagtggtgaaggagct
gatgtcactataacaacatctgaaggcagtgatctccaggcacattcatttgtaattctt
gtaagatgtccaaaattttatcaggaggttcagagtttagaaaagaaggtcacctggatg
gatatatgttttgaaggagcatatatctttctgtcatatatttatactgcaacctgcaaa
attaaggcaaaagatgactccttgtggatggacgtttttgatcttgctctgaagtatgag
tgtgaagatcttgtaacctatttagaatctttatataaagctaatccaactccaatcaaa
gtagtgacaccaacatcttcaaaagatgacattgttaaaacagatataaatatgctgaca
ccaaagatggttaattctaaatcagtaggaattattgaaaaaagagtcagaaggtgtata
gatctctcaccagagacgaaaagaccggtttcaattgacgtagtgattgaagatccaaaa
agagattccttagcgcaacccatatactctccagagttagtggtaatgagtagtgatccc
gaaaaggatggtgaaaaatgtagctctcaatcccctgatctctttaatgaatcatgtctt
aatgaaaatcaaagtggtagaacatttccatccagttcaccaccagggctgagtgagctt
caacagtctccatgcaataaatctatacaagatgaagaagcagatttgagtcttggaatg
gagtcaaaaacttcaaaacttaattcctcgggtagatcatcagatttcttcaggaatgat
gatcttgatgagttatcttcagattttccagatttcaataaaatgaagcaggtggctgat
gcagggaatttggaacagagtcgaacttcaagatgcaatgaagagataaaacagacagat
acaaataactgccctgaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagagggagagactgatgtaattgatctaacagtatgtagttcaggcagttcgaagtct
gttggtgctgacaatctgattatatcaagtgttcatgataatcctccgaacacagaatcg
gaaacagaggatatggagccactaaagctggcagatggaacagacacaaattcagaaaac
aatgaagaaccgcctttagaaccatgtatagctgttgtcaatattatgcaagcaacccct
actaagagctgtgatgcaaattatgatcaacaagaagagagcatgaataggtcttacatc
agtaatgtatgggatgactttgatgacatagggtgtggaatgttacccattgaggtttct
cccgtaaccccagttaaagcagtgggtacttcagctgatgaaatacataaccaagataac
gaatttcacttgtcccatgtgagtgacagtttttcccaaagtaaaggtaaatctaccata
aaaacagtagaagaaaaaacatcagctgtagtacagaataggaaaaatacatctgttggt
cattctctttccaaaacatctgattccgacggcagaaaggacagatccatctccaacatc
ggaagcggacaggggaatagtgcagctgatattgttgtagcctcagggtcttccttctcg
gatgatacgttactgagagttgcagaagagtttgaggactgcaatctttggatggatgac
tttgactccgttgacgatgtctcaaattccttacctaagagagacatggggccaaaatcg
ccaaaatcaaagaaagaccttctaaaaacacctaatgtaaaaattggtttaagtaaaaaa
tccataactccaatgccagactacaaaagaatgtcatctccagatttaaagaaagagcta
gagaaatatggaattcgtcctattagtcgtcggaaagccacattactcctgcagcatgtt
tacgaacagactcatcccctggtcaccgatagcgaggcagaatctagtttttgtgaaact
ccacaacggcagcctcctgagaaaagcaagaaaaatatatcatcacttcatgaaaaagtc
ttggcaaagaagacattacaaccaaagaacaagaaagcaagacctaatactaagagaaag
ggtgcaggttcacagccattgcccaatatacctgaaaaccaaagagaagaccagggagag
gaagacgagcgtgatctactcaattcatctcagacgtcaaataccagcactgacggctcg
gaatttgattgtgctgaagagtcgttgatggtgggtgctggagatgatgaagatgcgttc
actgctactcagcaagttgatattggcagtaaagtggcaaagttcataaaatgtgatcct
gaattatatgagaaaatacttctctatgaacccatctttgtcgaagatttacaagcgtca
ctaaaggcaaatgggatcaaaacaagcatgaataatcttcttgaaatattagatgaacag
tgcatcactttcagaactcagcaaggacaaaggaacagatcgaggaaaagaaaatcgccc
aaaaagaaaaacatcggctccccaaccaagtcgccaaaaaagaattcttga
DBGET
integrated database retrieval system
