Penaeus japonicus (kuruma prawn): 122246199
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Entry
122246199 CDS
T07703
Name
(RefSeq) replication factor C subunit 3-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03030
DNA replication
pja03410
Base excision repair
pja03420
Nucleotide excision repair
pja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122246199
03410 Base excision repair
122246199
03420 Nucleotide excision repair
122246199
03430 Mismatch repair
122246199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pja03032
]
122246199
03036 Chromosome and associated proteins [BR:
pja03036
]
122246199
03400 DNA repair and recombination proteins [BR:
pja03400
]
122246199
DNA replication proteins [BR:
pja03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122246199
DNA Replication Termination Factors
ELG1-RFC complex
122246199
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122246199
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122246199
Check point factors
HRAD17(Rad24)-RFC complex
122246199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_16
AAA_22
Sigma54_activ_2
AAA_2
Rep_fac_C
ABC_tran
DUF87
Motif
Other DBs
NCBI-GeneID:
122246199
NCBI-ProteinID:
XP_042860530
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MSLWVDKHRPRELGKLDFHQEKGAHLKKLVEGGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQNFQTPSKKKLEIVTIASNYHIEVNPSDVGIYDRVVIQELIKTVASSQQ
LDTSGQKEFKVVVLTEVDKLTKDAQHGLRRTMEKYMATCRLILCANSTSKVIPAIRSRCL
GVRIPAPAVEDVVKVLQAVCKKEGLSLPPELAKRIADKSNRNLRRAILMCEACRVQQYPF
SPQQDISIPDWEVFLQETAAKIVEEQSPNRLLEVRGRIYELLTHCIPPEVIFKGLLKELV
RNCDGELKCEVTRLAAYHEHRLNLGSKAIYHIEAFIAAFMAMYKKFLEESMSAMF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggttgataaacaccgtccccgagaactggggaagttggatttccaccag
gagaagggggcacatctcaagaagttggttgaaggtggtgatttcccgcatctcttagtg
tacggaccatcaggagcggggaagaaaactcgaattatgtgccttttacgtgagctgtat
ggccctggcgtggaaaaacttcggatcgaacatcagaattttcagacaccctccaagaag
aagctagagattgtaacaattgccagtaattaccacatagaagtaaatcccagtgatgtt
ggcatttatgacagggttgttatccaagaactcatcaaaaccgtggcatcctcacagcag
ctagatacaagtggtcagaaggaatttaaagtggtggtcctaactgaagttgacaagctg
accaaagatgcacagcacggccttcgacgcaccatggagaagtatatggccacttgtagg
ctgattctctgtgcaaattcaacatccaaggtcattccagccatccgcagtcgatgcctt
ggcgtgaggattcctgccccagcagttgaagatgttgttaaagtcttacaggctgtgtgc
aagaaggaaggcttgtcactgccaccggaacttgctaaaagaattgccgataagtcaaat
cgtaacctaagacgtgccatactaatgtgcgaggcttgtagagttcaacagtatcccttc
agtcctcagcaagatattagcattccagattgggaagtgttcttacaggaaacagcagca
aagattgttgaagaacagagccccaacagattgctggaggttcgaggaaggatttacgag
cttctaacacattgcataccacctgaggttattttcaagggcctgttaaaggagctggta
agaaattgtgatggtgaactgaagtgtgaagtgacaagactagctgcttatcatgaacac
cgtctgaatcttggttctaaagctatataccacatagaagccttcattgcagctttcatg
gctatgtacaagaagttcttagaagaaagtatgtcagccatgttctga
DBGET
integrated database retrieval system
