Penaeus japonicus (kuruma prawn): 122246698
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Entry
122246698 CDS
T07703
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pja03041
]
122246698
Spliceosome [BR:
pja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122246698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
TPR_16
TPR_19
TPR_12
ARM_TT21_5th
TPR_9
Thioredoxin_15
HAT
Motif
Other DBs
NCBI-GeneID:
122246698
NCBI-ProteinID:
XP_042861358
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MDMDDHSNLGMPDSDMLSDMIREEILDGEDSDQVPEGIQPEAYENNEEQDEEEMKETDEE
NMLKRPASASPSDDEPASKKRTNEVDKLWKNVNDNPNDFQAWTLLLQHIDQVSDLESGRE
AYDGFFGRYPYCYGYWKKYADLERRKGTKETAMKVFNRGLDAIRLSVDLWLHFMEYITSQ
YPDDEAFVRQEFERAIETCGLEFKSDKLWEAYINWESGGKRWKNVTQLYERLLATPTSKY
MQHWQKFQEHVKKHLPSEVVGVDEFLSLRRSVLTELNRSDIETPDEAPPGVEAAPGDEQV
GTNVDEETKALQKSIISARQKIHEANVVEAKALWSYEDAIKRPYFHVKPLEKSQLTAWRN
YLDYEIKQGKSSRVRVLFERCLIACALYEEFWMRYIRYLEESGAPESEVRAIYQRACHIH
LRDKFRPHLSWAAFEEEKGDGDRALEILEDIQTRVPGSLEAWMQAAGVERRRGNLEATKE
IFDRCLAICQEREDKNAHSHVSLKYARFHTLFCSDTDKGVEVLREALEYNKNNSNVLLAL
VDQALLCQPPKFTVAAEILKEGLDSSQQPGTRLMFAHRYFHFMSECGQETDSVTNGLRVL
REVQMEVRQMDACASETDTASNTSKQGDAASGGISVIESRREKRGSQEKTSPSPVNGTTG
TTQQQQAVNTNYQGYQQAGYGGYNQGYAQGYGASHYQGWGYPAQQGGYGYGQQGWGAYGS
YYGQR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggatatggatgatcacagtaaccttggtatgcctgactcggacatgctgagtgacatg
atcagagaggaaatactggatggcgaagactcggatcaggtgcctgagggcattcagcca
gaggcctatgagaataatgaagaacaagatgaagaagagatgaaagaaactgatgaggag
aacatgctcaaacgcccagcaagtgcaagtcccagtgatgatgaacctgcatcaaagaag
cgcaccaatgaggttgataagttgtggaagaatgtgaatgacaacccaaacgacttccaa
gcctggactctgctgttgcaacatattgatcaggtgagcgatttggaatccggacgagaa
gcttatgacggattctttggtcgttacccttattgctacggatactggaagaagtatgct
gaccttgaaagacgcaagggtaccaaggaaactgctatgaaggtgtttaaccggggattg
gatgccatccgactaagtgttgacctgtggcttcactttatggagtacatcacgtcgcag
tacccagacgatgaggcatttgtgaggcaagaatttgagcgtgcaattgaaacttgtggc
ttggagttcaagtcagacaagctgtgggaggcatacataaattgggagagtggtggcaag
agatggaaaaatgttacacagctgtatgaaagactcctagccactccaacaagcaaatac
atgcagcactggcaaaagttccaggagcatgtgaaaaagcacctaccaagtgaagttgtt
ggtgtggatgaattcctaagtttacggcgatctgttctaaccgagttgaatcgctcagat
attgaaactccagatgaagcccccccaggtgtggaggcagcccctggggacgaacaagtg
gggacaaacgtggatgaagagaccaaagctcttcagaaaagtatcatatctgcacgtcag
aagattcacgaagcaaatgttgttgaagcaaaggcattgtggagttatgaggacgccatc
aagaggccgtatttccatgtgaagccactagagaagagccagttgactgcctggaggaat
tacctggactatgaaattaagcaaggaaaatcgtcaagagtccgagtcctgtttgaaaga
tgcctcattgcatgtgccttgtatgaggaattctggatgaggtacataaggtacctggaa
gaatcaggagccccagaaagtgaagttcgtgccatctatcaaagggcgtgtcacattcat
cttagggacaagttcagaccacatctctcttgggcagcttttgaagaagagaaaggtgat
ggagaccgagcccttgagatcctggaagatatacagacaagagtccctggcagtttggag
gcttggatgcaggccgctggagtcgagcgtcgcaggggcaatctggaagctacaaaagaa
atatttgaccgctgtctggcaatctgccaagaaagggaggataaaaatgcacattcgcat
gtatcgctcaagtatgcgaggttccacactttgttctgttctgatacagacaaaggggtt
gaggtcctcagagaagccctcgaatataataagaataacagcaatgtgttgctagcactg
gtggatcaggctcttctgtgtcagcctcccaaatttactgtggcagcagaaatcttaaaa
gaggggcttgattcctctcaacaacctggaactagactcatgtttgcacacagatacttc
cacttcatgtctgaatgtggacaggagacagacagtgtgaccaatggcttgcgtgttctg
agggaagttcagatggaagtgagacaaatggatgcctgtgcatcagaaacagatactgct
agtaataccagcaaacaaggagatgcagcaagtgggggtatatctgtaattgagtcccga
cgggagaagagagggagccaggagaagaccagtcccagtcctgtcaatggcacaacagga
accacacagcaacaacaggctgttaacacaaattaccagggctaccagcaggcaggatat
ggtggctataaccagggctatgcacagggctatggagcctcgcattaccaaggatggggt
tacccagctcaacagggtggttatggttatggacagcaaggttggggtgcctacggaagt
tattacggccagagataa
DBGET
integrated database retrieval system
