Penaeus japonicus (kuruma prawn): 122247586
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Entry
122247586 CDS
T07703
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122247586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122247586
03036 Chromosome and associated proteins [BR:
pja03036
]
122247586
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122247586
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122247586
PBAF complex
122247586
GBAF(ncBAF) complex
122247586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
BRCT_2
Myb_DNA-bind_6
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
122247586
NCBI-ProteinID:
XP_042862910
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MAINPRKDGGPNIKYYESTETVSRFENVKTWLTKNAKKYVAADPPTNKGLSQLVIQLLQF
MEDNCGQKVTKPPMTKLPMKSFLDFKPGGGLCHIFSTVYKFKSDQGWRRFDFQSPSRKDA
NIELFREIEKSLVANKCWNKPAVYIHSDVDKELRNELKDIVKRHDGKIVEEEDDATHIVY
EDQDPLDDEFARGAMRRDKQTLFHFYYMPDSYDSWAAGVELDYDPPESPQFPDHQWKVCA
NWLQDLESYNEWMNEEDYEVDENGQKKKHSGCLSVDDTMGLSDPDKKKKAKKRPRSPPSP
RSKRKGGRSNATPGKPVKKTKTEEEEEDLTRDMEDPVAEPAVTEVTTGSKIQPSKGGNYM
DLDEEAADKTEKTEGQVGPPPLSENGYKIIGCAYGSIGPKIVGKYSSIKVLEVLLISFDF
KPGGGLCHIFSTVYKFKSDQGWRRFDFQSPSRKDANIELFREIEKSLVANKCWNKPAVYI
HSDVDKELRNELKDIVKRHDGKIVEEEDDATHIVYEDQDPLDDEFARGAMRRDKQTLFHF
YYMPDSYDSWAAGVELDYDPPESPQFPDHQWKVCANWLQDLESYNEWMNEEDYEVDENGQ
KKKHSGCLSVDDTMGLSDPDKKKKAKKRPRSPPSPRSKRKGGRSNATPGKPVKKTKTEEE
EEDLTRDMEDPVAEPAVTEVTTGSKIQPSKGGNYMDLDEEAADKTEKTEGQPVPDSEDTA
TDQTHHIIVPSYAAWFDYNAIHAIEKRGLPEFFNGKNRSKTPEIYLAYRNFMIDTYRLNP
TEYLTSTACRRNLAGDVCAVMRVHAFLEQWGLINYQVDADARPTPMGPPPTSHFHVLADT
PAGLQSINPPKVNQPSAAKQLMDFDKKPIDKKPEFGIGTEFGLKLDQYSKKTGALKNKSA
ASQAREWTEQETLLLLEALEMYKDDWNKVCEHVGTRTQDECILQFLRLPIEDPYLEDPEA
GSGPTPTALGPLAYQPIPFSKSGNPIMSTVAFLASVVDPRIAASAAKAAMDEFCRIKDEV
PAALLDSHIKNVADNAASNEGKVDPTAGLAKSGIAGTEPEGEEKKDGEGDAEKKDEAKKE
GEKKEEEKKEEAEKEKKEEAMEIDKPEEKKPEEKKEGEEEEKKEEKEVKEEKKEESPEEK
KLDAERERLRKDASVQQAASAALGSAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKL
RHFEELETIMDRERESLELQRQQLLQERQQFHLEQLKAAEMRARQHALHQLTQGASPAHS
PAPAMAQVHT
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaacccgcgcaaagacggaggcccgaatatcaagtattatgagtccacagag
accgtttccaggttcgagaatgtcaagacgtggctgacgaagaacgctaagaagtatgtg
gctgcagatccaccaaccaacaagggcctgtcccagttggttattcagctcctgcagttt
atggaggacaactgtggccaaaaagtcacaaaacctccaatgacaaaattacctatgaaa
agtttcctcgacttcaaaccaggtggaggactctgccacatatttagcacagtttacaag
ttcaaaagtgatcaaggttggcgaaggtttgatttccagtcaccatcaaggaaagatgca
aacattgaacttttccgggagatagagaagtccttggttgcaaacaagtgctggaacaaa
cctgcagtgtatattcacagtgatgttgataaagaattgagaaatgagctcaaagacata
gtgaaaagacacgatggcaagatcgtggaagaggaagatgatgccacccacattgtatac
gaagatcaagaccccttggatgatgagttcgcccgcggagccatgcgtcgggacaagcaa
actctcttccacttctactacatgcccgactcttatgactcttgggctgcaggggttgag
ctggattatgaccctccagaatcaccacagttccctgaccaccagtggaaggtgtgcgct
aattggttgcaagacttggagtcctacaatgaatggatgaatgaggaggattacgaggtt
gacgaaaatggtcagaagaagaaacatagtggctgcctgagtgtcgacgacacaatgggt
ctcagtgatcctgataaaaagaaaaaagcgaaaaagcggcctcgatctccaccttctccg
cgctctaaaaggaaaggaggtagaagcaatgctacccctggaaagccagtgaagaagaca
aagactgaagaggaggaggaagatctgacacgagatatggaagaccctgttgccgagcca
gctgtcaccgaggttaccactggttccaaaatccagccgagcaaaggagggaattatatg
gaccttgacgaggaagcagctgataagacagaaaagacagagggacaggtagggcccccc
cccctttctgaaaatggctacaaaattattggttgtgcctatggtagcattggtccaaaa
attgtaggaaaatattcaagtataaaagtactggaagtacttctcatctctttcgacttc
aaaccaggtggaggactctgccacatatttagcacagtttacaagttcaaaagtgatcaa
ggttggcgaaggtttgatttccagtcaccatcaaggaaagatgcaaacattgaacttttc
cgggagatagagaagtccttggttgcaaacaagtgctggaacaaacctgcagtgtatatt
cacagtgatgttgataaagaattgagaaatgagctcaaagacatagtgaaaagacacgat
ggcaagatcgtggaagaggaagatgatgccacccacattgtatacgaagatcaagacccc
ttggatgatgagttcgcccgcggagccatgcgtcgggacaagcaaactctcttccacttc
tactacatgcctgactcttatgactcttgggctgcaggggttgagctggattatgaccct
ccagaatcaccacagttccctgaccaccagtggaaggtgtgcgctaattggttgcaagac
ttggagtcctacaatgaatggatgaatgaggaggattacgaggttgacgaaaatggtcag
aagaagaaacatagtggctgcctgagtgtcgacgacacaatgggtctcagtgatcctgat
aaaaagaaaaaagcgaaaaagcggcctcgatctccaccttctccgcgctctaaaaggaaa
ggaggtagaagcaatgctaccccaggaaagccagtgaagaagacaaagactgaagaggag
gaggaagatctgacacgagatatggaagaccctgttgccgagccagctgtcaccgaggtt
accactggttccaaaatccagccgagcaaaggagggaattatatggaccttgacgaggaa
gcagctgataagacagaaaagacagagggacagccggtgccagatagcgaggacacagcc
acagatcaaacccatcacatcattgtgcccagctatgctgcctggtttgactacaatgct
attcatgccattgaaaagagagggctcccagagttcttcaacggcaagaacaggtcaaag
actcctgaaatttatttggcttacagaaacttcatgattgacacttatagattaaaccca
actgagtacctgacctctacagcctgccgccgcaacttggcaggcgatgtctgcgccgtc
atgcgtgtccatgctttcttggagcagtgggggcttatcaattatcaggttgatgcagat
gcccgtccaacccccatgggtcctccccctacctctcatttccatgtgttggctgacact
cctgctggtctgcaatccatcaatcctcctaaggttaatcagccatcagcagctaagcaa
cttatggacttcgacaagaagcccatagataagaaaccagaatttggcattggtacagaa
ttcggcctgaagttggatcagtactccaagaaaacgggagctctcaagaacaagtcagct
gctagtcaggccagagaatggactgaacaggaaaccttgcttttgcttgaagctcttgag
atgtacaaggatgactggaacaaggtttgtgaacacgtgggcaccagaacacaagacgaa
tgtatcttgcagttccttcgcctccctattgaggatccttatctggaggaccccgaggct
ggcagtggtccaacccccacagccctgggacccctggcataccaacctatccctttcagc
aaatccggaaaccctattatgtccacagtggctttcctggcatctgtcgtggatcccagg
atcgccgcctccgcagccaaggcagccatggatgagttctgcaggatcaaggacgaagtt
ccagctgctcttcttgattcgcacatcaagaatgtcgctgataacgctgcctccaatgaa
ggaaaggttgatcctactgctggcttggccaagtctggcattgctggcactgagcctgaa
ggggaggagaagaaggatggggaaggagatgcagagaagaaggatgaagctaagaaagag
ggagagaagaaggaagaagagaagaaggaggaagctgagaaggagaagaaggaagaagcc
atggaaattgacaaaccagaagaaaagaagcccgaggaaaagaaggagggtgaagaggaa
gaaaagaaagaagagaaagaggttaaggaggaaaagaaggaagaaagtccagaggagaaa
aagctggatgcagagcgagaaagattgcgcaaggatgcctctgttcaacaggcagccagc
gcagctcttggctcagcagctgtcaaggctaaacatctggctgcagttgaggagaggaag
atcaagtctcttgttgctcttctagtggagacgcagatgaagaagctggaaatcaaacta
cgtcacttcgaggaactcgagacgatcatggaccgggaacgagagagtttggagctgcag
aggcaacagctgttacaggagcggcagcagttccacctggagcagttgaaggccgccgaa
atgcgagcccgtcaacacgctttacaccaactcacacagggagcaagccctgcccattcc
cctgcaccagccatggcacaggtacacacgtga
DBGET
integrated database retrieval system
