Penaeus japonicus (kuruma prawn): 122247637
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Entry
122247637 CDS
T07703
Name
(RefSeq) TATA element modulatory factor-like isoform X1
KO
K20286
TATA element modulatory factor
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pja04131
]
122247637
Membrane trafficking [BR:
pja04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122247637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
ATG16
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
122247637
NCBI-ProteinID:
XP_042863012
LinkDB
All DBs
Position
Unknown
AA seq
1575 aa
AA seq
DB search
MSWFDTAGFTSLAKSALKEAQRTIDKALDIEEENSENVVPTATVPPSGQKGISEKLKEES
ENFFASFGLDKKKSPLTPANTPVDSSAGTTPVQEFDDSDIRGPPSTQDEDGRKTSSAMVG
SLWGSFTGSFFENTLIGKQQSEDTPAGTSEKDVVATQPPRSSTSLPSLKLAKSPVSTQPR
TASLEEQRGVQVGNEQSEVGDSDEQKSTEDGEGSRQEWGWGWESSIMVMSAEQQQLEGEF
GTTQAELEAREDSLADDNIDVEGFARSRLVVGSVDSDSGGLMRQESQGSLCGRSVDLDVP
SSISEDVFDGSLDNQRSITLETGYDLGSEFSEGLRRSSISHIFKAENSDQRTTMSRGNSE
VDTPDSIVVLTSDGSSPEGDSSRVSGGSTDRSKLTVTLLSEKITSPISSPESIEVLGSSS
LVTSPSSIEVLSGVSSSDSSPTHQDSCSNTLTQDLSPTPTHIVSTQPTLHTSNKHAVEAP
ALSSALTQEKVQQESRGNDKSSIDRKDGQCKGNAEESTTTSQGQAVVKQPTHRESEESVC
TSKEVASPKMPAENSPGVREVDNSSRASSSLTEDTSASESIHSTSTSSTHTVLDASLIAH
DNQIPTDVGESVLPEGGSQLSAPEGNINAAEETTKGDSEALVEERKGVIAAAVVASTADV
GSEVMEGNISGVSLDMSVESGGSSDTITASVDSTQMLWSSRSHIGGGEQDQIDGSVTQDS
GMTGSGGSVVRCLLEEAMGDEEATSGASSPPEREHSPSSSERSEALKVGSGHTSGHSSGD
EIETTTSSDIEVISSPSLDGSTVARGSAAASRVWASAQRGLRSFLNDRSESPASDSSSNN
KKNNTEKAETVPSSMTTSFTSISESEGETYTPLVLGDLNSLDHSRISQVLHDLQHFEKGH
RRNQSNLSETSESSSEPHSPEVEKLLKKISQLSEILEARETKLMELSQVNAALQDTNLRL
KSNIEELEGGCATDATESLREEYTQRLVTMERKFQQALREKEAIKKQLEEVRAEAATRLS
SSEVAREREEKDIVIQELREEGEKLSKQQLNYSNIIKKLRAKEKESETTIKTQKDKLEEQ
SRELERLRKQLSAKEEVERRQIDAVCQLNTNNQRLEQLIKDTNAENAELEGKMSVLKTAL
DTAYKEMAELQRAAATKDAEAQEQALSAEVAARKQIEAALTEAQSQARREQEALMAQVME
LQDTLSRAESQANRKERQLRADITELQQRVSEAESRAEELSGAVSAATRPLLRQMENLQS
THATQQSTWENLEATLTRRLNEAQTAAASSIEKERAARDQSSEMGAKAAALQTQVANLQA
ENTKLSSELEILTSKMNSLAETRSKENTQILALKTSFADEIREVKRERDSLEQQLEIEKT
ALTAEKKKTSALQEQVKERDRKLIQAASGAGESRTSTPRSSPTPSLSRLSMTGSLNESFS
GSQWGDEVFESGWSRGTSLYESMRGNATATVEALTSQLRQREGEVHHLHSEVTRYEAQRE
SLAQELVSMTRQIETLQTKVQDFERLKAQYTDMEQKYNALLQMHGEKVEEVEELRLDLAD
VKEMYKAQIDALLRQ
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcgacacggccgggttcacttccctggccaaatcagccctgaaggaagcc
cagcgcaccatcgacaaggccctagacatcgaggaggagaacagtgagaatgtcgttccg
actgcgaccgtcccgccctccggacagaaagggatttcagagaagctcaaggaagaatcg
gagaatttcttcgcctccttcggcctagacaagaagaagtcccctctcacccccgccaac
acccccgtagactcatcggcaggaacgacacccgtgcaagaatttgatgactcggacatt
cgcggtccacccagcacacaagacgaggatggacgcaaaacttcatccgccatggttgga
agcctttgggggtcattcacaggttccttctttgaaaataccctcattggcaaacaacaa
tcagaggacactccagcgggtacctcagagaaggatgtcgtcgccactcagccaccccgc
agcagtaccagcttgccatcgctgaagctagccaagagccctgtgtcgactcagcctcgt
acagctagcctggaggagcagaggggagttcaggtaggcaatgagcagagtgaagtcgga
gacagtgatgagcagaagtcaacggaggatggagagggcagcagacaggagtggggatgg
ggatgggaaagcagcataatggtgatgtcagcggagcaacagcagttagaaggggaattc
ggcaccacccaggctgagctagaagccagagaagacagtttggcagacgataatatagac
gtagaagggtttgccagaagccgcttggtcgtgggtagtgtagacagcgacagcggtggc
ttgatgcgccaggagagccagggttcactctgcgggaggtccgtagacttggatgttccg
tcctcaatatcagaagacgtgtttgatggcagcctggataaccaaaggagcatcacgctg
gagacgggatacgacctaggtagtgaattttctgaggggctcagaagaagtagcataagc
catatttttaaggccgaaaacagcgatcaaagaactacgatgtcgcgcggtaattccgaa
gtcgacacaccagacagtatagtggtgctcacgtcagatggtagctcgccagaaggggat
tcttcaagagtcagtggaggtagtactgacaggtcgaagttgacggttaccctcctttct
gagaaaatcaccagtcccatcagctcccccgagtcaatagaagttcttggatcatctagt
cttgtaacttcaccttcttcaatagaggtattaagtggtgtttcatcaagcgattcatct
cccacacatcaggattcatgtagtaatactctaacccaagacctaagcccaactcccact
cacattgttagtacacagccaacgctacacacatcgaataagcacgccgtagaagccccc
gcactcagctctgctttgactcaggagaaagtccagcaggaaagcagaggaaatgacaag
tcttccatagatagaaaggacgggcagtgcaagggaaacgcggaggagtccactactact
agtcagggtcaggctgtggtgaagcagcccacccaccgggaatcagaggagtctgtctgc
acctcgaaggaagtggcgagtccaaagatgccagcggaaaatagtcccggcgtaagggag
gtggacaacagttctcgtgccagcagcagtctgacagaggacacgtccgccagtgagagc
atccacagcacttctacctccagtacccacacggttcttgatgccagcctgattgcccat
gacaaccaaatacccacagatgtaggggaatcagtactacctgaaggagggagtcagttg
tcagcacctgaaggaaatattaatgctgctgaggaaaccacaaagggcgacagtgaggcc
ctagtggaagaaaggaagggagttatagctgcagcagttgtggcttcaactgctgatgtt
ggttcagaagtaatggaaggaaacatttctggggtgtcccttgacatgtcagtggaaagt
ggtggcagttctgacaccattacagcttctgtggattcaacacagatgttatggtccagt
agatcccacattgggggaggcgaacaagaccagatagacggcagtgtaacgcaagatagt
ggaatgacaggttcaggaggctctgtcgttagatgcctcttagaggaagccatgggagac
gaggaagccactagcggagcatcatccccgccagagagggaacactctccatcttcctct
gaaaggtcggaggcactcaaggtcggatctggccacacgtcagggcatagctcaggtgat
gagattgaaacgactacgtcatctgatattgaagtgatatctagcccaagcttggacgga
agcacggtagcccgaggatccgctgcagcgtcaagagtctgggcatcagcgcaaagagga
ctccgaagtttcctcaacgacagatctgagtctcctgcttcagattcttcgtccaacaac
aagaagaataacacagaaaaagcggagacggtcccctcatccatgaccactagcttcacc
agcatcagcgaatctgaaggagagacctatacccctctggtcctgggcgacctcaatagt
ctcgatcattcgcgcatctctcaggtgctccacgacctgcagcactttgagaaaggccat
cgtcgtaaccagtcaaacctctcagaaacaagtgaaagttcttcagagccgcattcccca
gaagtcgaaaagctccttaagaaaatatcgcagttatctgagatattagaagctcgagag
acgaaattgatggaattgagccaagtcaatgcagcattacaggatacaaatttacgccta
aaatctaacatcgaggagctggaaggaggctgtgccacagacgcgaccgagtccctgaga
gaggagtacacgcagcgcctggtcaccatggagaggaagttccaacaggcgctgcgggag
aaggaggccatcaagaagcagctggaggaagtccgagcggaggcagcaacgcgactcagc
tcctcagaggtggcccgggaacgcgaggagaaggacatagtcatccaggagctgcgcgag
gaaggggagaagctcagcaagcagcagcttaattactccaacatcatcaagaaactaagg
gccaaggagaaggagagcgagacgaccatcaagacacagaaagacaaattagaggaacaa
tccagagaacttgagcgactgaggaagcagctctcggccaaagaggaggtggagagacgt
cagattgacgcagtctgccagctaaacaccaataaccagcgactggaacagctgataaag
gatacaaatgcggagaatgcggaactcgagggcaagatgtctgtcctgaagactgctttg
gatacggcatacaaggaaatggcagagttgcaacgtgctgcggcgaccaaagacgctgaa
gcgcaggagcaagcactgagtgccgaagtcgcggccagaaagcagatagaagccgctctg
accgaggcacagtcgcaggcacgcagggagcaggaggcacttatggctcaggtcatggag
ttgcaggacacactaagcagagctgagagtcaagcaaacaggaaagagagacaacttaga
gcagacatcacagaactgcagcagagagtatcggaagcagagagccgagcagaggagctg
tccggtgcggtgagtgctgccacgcgacccctgctgcgacagatggaaaacttgcagtcc
acgcatgccactcagcagtccacctgggaaaatctggaagcgactctgacgcgacggctc
aatgaagcacagactgctgcggcatcaagcatcgaaaaggaaagagcagcccgagaccag
tcttcagagatgggtgctaaggcggcagctctgcagacacaggtggccaacttacaagct
gaaaacacgaagctttcctccgagctggaaatcctcacttcgaaaatgaactcgttggcg
gaaacgcgatcaaaagagaacacccaaatactagccctcaagacatcctttgccgacgag
atccgggaagtgaaacgggagagagacagcctggagcagcagctggagatcgagaagacg
gcactgacggcagagaagaagaaaacgtcggcccttcaggagcaggtgaaagaacgcgac
cgcaagctgatccaggcggcaagcggcgcgggggagagtcgcacgagcactcctcgctcc
tccccaaccccttctctgtctcgcctgtccatgaccggctctctgaacgagtccttctcc
ggatctcagtggggggatgaagtgttcgagtcaggatggtcccggggaacatccctctat
gaatccatgaggggaaatgccactgcgacagtcgaggctcttacttcacaactacggcag
agagaaggtgaggtccaccaccttcacagcgaagtgacaagatacgaggctcagcgtgaa
tccctggctcaagagctcgtctcaatgacaaggcagattgaaacgctccaaaccaaagtg
caggactttgagagactcaaagcacaatatacagacatggagcaaaaatacaatgcccta
ttgcagatgcacggagagaaggtggaggaggtagaggagctgcgtctcgacttggcagac
gtgaaggagatgtataaggctcagatcgatgccctcctccgacaataa
DBGET
integrated database retrieval system
