Penaeus japonicus (kuruma prawn): 122247676
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Entry
122247676 CDS
T07703
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pja04121
]
122247676
Ubiquitin system [BR:
pja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
122247676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
122247676
NCBI-ProteinID:
XP_042863103
LinkDB
All DBs
Position
Unknown
AA seq
1954 aa
AA seq
DB search
MFDWEEGDRFSFEDSERFEEDSLCSWISEPESLVNNWRGWKRSDKIACLLYGRNRDQDGR
VHSLTEMCARTVAAHIPFEVVEQMMPPVPEQLQLLIAFWSFPENEEDIRLYSCLANGNAD
EFLRGENHYKHKSVHDPLQIGFHLSATVAPSASGTKGQFNVAVTFDRGRITTCNCTCSAN
ASWCSHVVAVCLHRIHQPSQVKLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTAQR
LIDEILSSQTSDINTVSGAPDPTAGGSANEQMAWWLDESNLHENIHKILVKFCVPSPIVF
SDVNYLSSTAPPVAAEWSSLLRPLRGREPEGMWNLLSIVREMFKRNDRNAIPLLEIITEE
CLATEKILVWWVNTKVALHMGSSGHGGKNNMNSNSHGSQYACSSLCDEIVVLWRLAALNP
ALSPQEREQLIAKFKGWHLKVLEKVAKSKETGTNGGGGSNKRGTDVDVFPGFKPAIEPCY
LDWNDYPLPGVTYSHTASRYYCPVMRFRHDSRHESQAAPISAPHPRNPTSHAGPKRPSER
RVLISSGNAGDKENLGAGVSLAGHRHSGHRSSSVSSEGFCDNDLGRDSDSPPDHRSPEQV
DSGQVSRQSSREDRPMGALGLAAAFDRSRDDRDKSSPDDGGAESDWSGVAEPSRSQRSRG
GSRGQRSRDQNGTDEYDVYVYNANLVGDGNSVSDCSGAERGAEIFNNLKKFEDPLEILFA
RAEGLHAHGHLQEASGLAVQLAHELLANPPNLMIELPPPPSKGKRKKVNPASHHLTCLAS
ATLSKCAFLCTVLAENPDHTHLAFQVAMFGLEMARPPASTKPLEVKLANQESDLVSLLKR
LPLGPLELAVIRDKAEKMRSGTLKSRGEALLPLMLASFLFDALVIAGNNKSSVGGQSYRQ
PQDEALGFDAAVAAIGMKANVCEADHPLLCEATRRQRGELALTLLTHYKDDQDRLARIMD
KLLDKEVHQMYKAPSLPTYYVNNVPNQQTSTSGLENNEASSSIRVADSPAAGAVSSSPMP
GVAAAAAASAAPPILGTPPSVPPGNQVPAPGQQPQQPTVQRDRHTAGGAEIEGSMAGLSL
SPSQPVGGARAKEGTSSARFVEGEEGESPSWEDDYKAWEEKCVGKQRKKRNQACTLETTS
TGVEVKLNLADNSPTSGRCAAWIKSTGPGSDSGSSGNSSDSIVSSSSGDKISGLEANKPV
ESPPLGYPLIRPVPQPTPESTTTTHPRPQPTFGKGVRFKGKRAYPTVPNQPSEASAYFMF
ELAKTVLNRAGGNISTSLFTQPSSSQNHRGPHRPLHMCAFQIGLYALGLHNCVSPNWLSR
TYSSHVSWITSQAVEIGSPAVSFLIDTWEGHLTPQEAASIADRASRGRDAATIKAAAKLA
LSCLPHAHALNPNEIQRAIIQCKEQSDEMLESACFAVEGAAKGGGVYPEVLFSVARRWYE
LYEARTRHQARHQARTSGGQHAGDIPFEDQGAPHNLPLPPPPPLNPPTPPNQQQQQPPIP
PMDAQSQPGLHPPVSVGMNGSGGAGALPGVTGYPVAAPPSSVPYALTGIPYQLGYNYIQG
LPTSVSCINPQMPMPMYIQPPGVPFSGAQGVSQPLMPPPSMQYFPPVSIPSTLPQKILTS
KSIHDLAASRHYSIRQILDATPRFSKGTLPGAGGMGGGLPGGQQNLGPQPPPLGAGPPPL
PQQPPLIQGNTPPQQGFYPLPYSNAVGNGGVSTAGFIGAQPTALLSWVRAQGPHMVQPSP
HQPQLPPPPTSQPQQQVPGLVGGQQVNNNGSMNYLLSTYRVGMLALETLGRRVHDDRPQA
KYARNPPYGEDVKWLLGVAKKLGQQYLHQFCMCSVNSVVSPFVLQELSVESAQYLARHSP
ALFTQQLRSPILQPLVQKCQQMFIQCTHLKMYYITPTEYDEFISIIRAARSAFQMTPGGM
VQFNELLQALRRSKSCKKELWTRITNALQQPTPV
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattgggaggaaggggatcgtttctccttcgaggactcggagcgatttgaagag
gactcactatgtagctggattagtgagcccgagtccctcgtcaacaattggaggggatgg
aagcgttcagataaaattgcctgcctcttgtatggccgcaacagagatcaagatggcaga
gtacattctctcacagagatgtgtgcccgcacagtggcggcacacatcccttttgaagtg
gttgaacagatgatgccaccagtgccagagcagctacaacttcttattgcattttggagc
ttcccagaaaatgaggaggacattaggctgtacagctgcctggccaatggcaacgcagac
gaatttctccggggggaaaaccactacaaacacaagagcgtccatgaccctttgcagatt
ggattccatctaagtgccactgtagcaccatcagcttctggaacaaaggggcagttcaac
gtggctgtaacatttgacaggggtaggatcacaacatgcaattgtacctgttctgccaat
gcctcttggtgttcacatgtcgttgcagtctgcctccaccgcatccaccagcccagtcag
gtgaaactacgtgctcccgtgagcgagtcattatcccggctacagagagatcagttgcag
aaatttgctcagtacctcatcagtgaactgccacaacagatcctgccaacagcacagcgg
ctcattgatgaaatcctctctagtcagacatccgatatcaatacagtttcaggagcacca
gacccaacagctggtggatcagccaatgagcagatggcctggtggctagatgagagcaac
ctccacgagaatattcacaagatcttggtcaaattttgtgtgccatctcccattgttttt
agtgatgtcaactacttgagttcaacagccccacctgtagctgcagaatggtcatcctta
ttgagacctctgagagggagggagccagaaggcatgtggaaccttctctccattgtgagg
gagatgtttaagcgaaatgaccgcaatgccattcccctcttggagattatcacagaggaa
tgcctggctacagaaaagattttggtatggtgggtgaatacaaaggttgcactgcacatg
gggagctctggccatggtggcaaaaacaacatgaactccaacagtcatggaagccagtat
gcttgctcgtctctttgtgatgaaattgttgttctttggcgtttggcggcacttaaccct
gctttgtcaccgcaggagcgtgagcagcttattgccaagtttaaagggtggcatctcaag
gttttagagaaggttgctaaaagcaaagaaacaggtacaaatggaggaggtggaagcaac
aagagaggcactgacgttgatgtattcccagggttcaagccagctatagagccatgttac
cttgattggaatgattaccctcttccaggagttacatattcccacacagcatcacgatat
tattgtcctgtcatgcggttcagacatgattctcggcacgagtcacaggcagcacccatc
tctgcaccacatccaaggaatcccacgtctcatgctgggcccaagcggccttcagagcga
cgtgtgctcatcagttctggaaatgctggtgacaaagagaacttaggtgctggagtctct
ttagcaggtcatagacacagtggtcatcgcagcagtagtgttagtagtgaaggcttctgt
gacaatgacctgggccgtgacagtgactctccgccagatcataggtcacctgaacaggtt
gactcaggtcaggtgtcccgccagagctcaagagaggatcgtcccatgggagctctaggg
ctggccgcagctttcgatcggtcaagagatgacagggataagtcatcgccagatgacggc
ggagcagagtcagactggtctggtgttgctgagccatccagaagccagagaagccgagga
ggtagtagaggccagcgttccagagaccagaacggaactgatgaatatgacgtgtatgtg
tataatgccaatttagttggggacgggaatagtgtaagtgattgtagtggggctgaaaga
ggagcagaaattttcaataacctgaaaaagtttgaagatccccttgagatactgtttgct
cgtgctgagggtttacatgctcacggacatttacaagaagcctctggactggcagtacaa
ctagcacatgagctgctggccaaccctccaaatctcatgatcgagttgccaccaccaccc
agcaaagggaagcgtaagaaggtgaacccagcatcacaccatctgacctgtctagcctca
gccaccttgagtaaatgtgccttcctctgcactgtcctggcagaaaatcctgaccacact
cacctagctttccaggttgccatgttcggcttagaaatggcacgacctccagcgtccact
aagccactggaagtgaagctagccaaccaagaaagtgacttggtttccctcctgaagcgc
ctgcctctcggtccactagaattagcagtcatcagagataaggctgagaaaatgcgatca
ggcacactcaagtctcgtggcgaggctctcctgccattaatgcttgcttccttcttgttt
gatgctctagtcattgctggaaacaacaaaagttcagttggaggtcagagttaccgccag
ccacaagatgaagctcttggcttcgatgcagctgtcgcagccattggcatgaaggccaat
gtatgtgaggcagatcacccactcctctgtgaggccacaagaagacagagaggagagttg
gcactcacgttgctaacacactacaaggatgaccaggacagactagctcgtatcatggac
aagctgctagacaaagaggtacaccagatgtacaaagcaccctctctgcccacatactac
gtgaacaacgtgcccaatcagcagacaagcactagtggtttggaaaataacgaagcaagt
agcagcattagagtggcagattctccagcagcaggagcagtcagcagcagtcctatgcct
ggcgtagcagcagcagcggcagcctctgcagcaccacccatcctgggcacaccaccatca
gtaccccctggcaaccaagtacctgcacctggacaacaaccacaacaaccaacagtacag
agagacaggcatactgcaggtggagcagagatagaaggctcaatggcagggcttagtcta
tctccatcccagcctgtaggaggagcaagggccaaggaagggacatcatccgctaggttt
gtggagggcgaggaaggggaaagcccaagctgggaggacgactataaggcctgggaggag
aaatgcgttgggaaacagcgcaagaaacgtaatcaagcatgtactctagaaactacctca
acgggtgtggaagtgaaacttaacttggcagataactctcccacctctggtcgttgtgca
gcatggatcaagtctacaggccccggctcagactccggctcatcaggaaactcctcagac
agcattgtgtcttcatcaagtggggataagatcagtggtcttgaagcaaataaacctgtg
gaatcaccaccacttggctatccattgatacgacccgttccacaaccaacaccagaaagc
acaactacgacccatcctagaccacagcccacttttgggaaaggtgtgcgatttaagggc
aaaagggcttatcccactgtacccaatcaaccctcagaggctagtgcttacttcatgttt
gagttggccaagacagtgctgaacagagctggaggaaatattagcacatcattatttact
cagccaagcagttcacagaaccatagaggaccacatcgaccacttcacatgtgtgcattc
cagattggcctctatgcccttggccttcacaattgcgtcagccctaactggctctcaaga
acatactcctcacacgtttcatggattacaagccaagctgtggaaattggatcccctgct
gtttcgtttttgattgacacgtgggagggccatctgactccacaagaagcggcgtcaata
gcagacagagcatcaaggggtcgcgatgctgcaacaataaaagccgcagcaaaattagcc
ctctcatgcctgcctcatgctcatgctctgaatccaaatgagatccagagggctatcata
cagtgtaaggagcaaagtgatgaaatgctggaaagtgcttgctttgctgttgagggtgca
gctaaagggggtggcgtatatcctgaagtcctattctctgtggcacggcgctggtacgag
ctttacgaggcccggacaaggcaccaggcccgccatcaagcaagaacatcaggtggccag
catgctggggacatcccattcgaagatcaaggtgctccacacaatcttccacttcctcca
ccaccaccactaaatccacctacaccaccaaaccaacaacagcagcagccacccattcct
ccaatggatgcacagtctcagcctgggttgcatccaccagtttcagttgggatgaatgga
agtggcggtgcaggtgcattacctggtgttacaggctatccagttgcagccccgccttcc
tcggtgccatatgccctcacaggcattccataccagcttggatataattacattcagggt
ttgcctacaagtgtgtcatgcatcaacccacagatgcccatgccgatgtatatccagcca
ccaggcgtacccttcagtggggctcagggtgtgtctcaacccctgatgccccctccttcc
atgcagtacttccctccagtttccataccctcaactctaccccagaaaattttgacttca
aaatccatccacgatttggccgcctcacgtcattacagcataaggcagatcctggatgct
accccaaggttctcaaaaggtactctaccaggagcaggaggcatgggaggtggtctccca
ggaggacaacagaatctagggccccagcctcctcccttaggtgcaggacctccaccctta
ccacagcagcctcctctgatacagggcaacacacctccacagcagggcttttacccgctg
ccttactccaatgcggtcggaaatggaggtgtatcaacagctggcttcataggagcccag
cccacagccctactgtcatgggttagagcccagggccctcacatggtccaaccttcccca
catcagccccagctgcctccaccacctacctcacaaccacagcagcaggttcctggactt
gttggtggccagcaggtgaacaacaatggatctatgaattacttgttaagtacatatcgt
gtgggtatgttggcactggaaaccctaggcaggagggtccatgatgacagaccacaggca
aagtatgccaggaacccaccctatggagaggatgtcaagtggctgctgggagtggccaag
aagcttggtcaacagtatcttcatcagttctgcatgtgttcggtgaatagtgtggtttca
cccttcgtgcttcaggaactgtctgtggagtcagcacagtatctagctcggcactcgcca
gctctctttacacagcagctccgatctccaattctgcaacctcttgtacagaaatgtcaa
cagatgttcatccaatgtacccacctcaagatgtattacataaccccaactgaatatgac
gagtttatatccatcatccgggctgcccgatctgctttccaaatgacacctggtggaatg
gtacagttcaatgagctgctgcaagcattgagaaggtcaaagtcatgcaagaaggagttg
tggaccagaatcacaaatgcactgcagcaaccaacacccgtatga
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integrated database retrieval system
