Penaeus japonicus (kuruma prawn): 122247769
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Entry
122247769 CDS
T07703
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122247769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122247769
Enzymes [BR:
pja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122247769
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
122247769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
122247769
NCBI-ProteinID:
XP_042863280
LinkDB
All DBs
Position
Unknown
AA seq
1806 aa
AA seq
DB search
MGSYGQLSYTCVDDIDFRVYTDEEIKKISVLRITNDQSINELGHLSPDGLYDLRMGPMSM
RERDQCQTCRQDSYLCQGHCGHIELPLPLYNPFFYDVLRNIVRRICWTCFRYQAKAHQAL
QLVYQIRLLKEGYGQEALQMGEIASRIISGEGGEAEEVQVGIDDKDIRGTEKGYSKVMMM
RQLDKELSTYYKAVVSGGTCSADTSTSNVKAVHQLVLRDFYSETDPKPVCHFCNIRKLRL
TLQNSRFMVANKSATVTRRPNVEMKRTATPVKAKAKAQAKPMSKKSESVFSDEDESDGYD
EAEDKDSDEDETSQRKDADDKEGSPGKDGEDEEDSPKKDVDKSEEEEEETKEFSKSSIVS
DSQSYVTPEQVRNALRKVWLQDSELLKHLFPILATSELKYPTDMFFIHTLLVIPPKYRPC
DFQNGMTVEHETSTLLKNVVKLSKCLTFLISLVNGTIEELPDTLNYIISEIPGKNPLEKS
QTVWFQMQGSVDNIFDADLNRMVKVTTKGIRQVIEKKNGLFRRNLMGKRVNYSARSVAAP
DPLLAVDEVGVPMDFAIRLSYPVPVTQWNVEELRQLVINGPEVYPGAVMVEDEEGRKKRL
GTLDKNQRIAIAKQLLTPTESHVRKVNAAKIVYRHLQNGDLVLMNRQPTLHRPSIQAHRS
RIMPKDRVLRMPYANCKAYNADFDGDELNMHFPQNELARSEAHHLITTKNQYLTPKDGSP
LAGLIQDCVVSSVMLTMRGTFFCKEDYQQLLYSALSEETRKIEILPPSVLKPKMLWSGKQ
VISSLLYNIIPKTKARPSFNFKTSVKVDLWQTCESRKWKAGGDPEKRKESMTESDFVMRD
GELLSGVIDKSAIGSTSHGLVHICYDLYGGSVASRVLTAINRLCVYYLQWSGHTISVKEF
VTPKTLSKKRRESLADLVKKAHSKVSQRLNVPEEEFRDYFESSHMSGNDKEMAAIDAAYT
AVLGPTTSEITAENEKGLLRCSLDNHMRMMVDTGAKGSKVNMNQMASLFGSVAIDGKRMP
ISITGKFLPSFKPYEANPRAGGYIPHRFMTGMDPQAYFYLCIVGRDSLQHTAVKTANSGY
LQRCLIKHLEGIQVKYDMTVRNSDGLVLQFNYGEDGQDVTKVPFLKNTDTMDVLVNNYSR
LLEDRSLNIAKSVGDKEEVDHYTKKLKKWVKKYGQAGSGRRSGFLKFCKKMSKTIEATGY
CKKTGRPDSYKVLKEIWAELPEEERTKYEKISSKCPDPVNSVFSGAANLGVVSEALEQLI
DDYYEENYAKKPVREQKLTYEQVATTVHMKALTSKVDPGEAVGALCAQAIGEPLTQMTLN
TFHFAGRDELNVTLGVPRMVEILRTAGKNISTPIMEVPFHKGISKAYAMALQIKLNEVPL
AKVLHGLDVSVQLKRDGKNRIHRSTKVKFTFLPHKQYKHVCAVNPSRVLQYMERQFIDKI
LLREIQRSFGKKVSACATATDQKGGSKNRHAESDNDDVDEDEDTLKEMKEAENRKEAAAE
SSGDEEEDEPEAGVEDGTLASRTVKANEQDYSDGEDDEEGLTNEGDNEKELSEDEGLGKE
EDVEEDPGPAIAKTPKRKKGSNISQEVVLKRKNGVIAKDSWIVDYSFDTEEELWCEVTLL
LPLSGGNYDIPSIVRQRSQRSLIHYVPGIKRVFVVEKDDGLLLRTEGVNVFTMFEYEHLL
DVNRLYTNNIHQVAQMYGIEAAQRSIIRELRAVQSAYDIKVDFRHLTLLADYFTCEGVYK
ACSRQALATCLSPLQKMSYETCTQFLKSALLQGEKDRMLSPSANIAVGQPVKVGTNVMHV
LPVIKL
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctatgggcagttgagttacacctgtgtggacgacattgacttccgtgtctac
acagatgaggaaatcaagaagatatccgtgttacggatcacaaatgaccagtccattaat
gagctgggacacttgtctcctgatggcttgtatgacttacgcatgggccccatgtccatg
cgtgaacgagaccagtgtcagacttgcaggcaggatagctacctctgccaaggtcattgc
ggacacatcgaattgcctctgccgctctacaatcccttcttctatgatgtcttaaggaat
attgtcaggagaatatgctggacctgcttcagataccaagcaaaggcgcatcaagcactg
cagctggtgtaccagattcggctgctgaaggaaggttatgggcaggaggctctgcagatg
ggagagattgcctccaggatcatctcaggagaagggggagaggcagaagaggtacaagtg
ggtattgatgacaaggatatcagaggaactgagaagggatattcaaaagtgatgatgatg
agacagcttgacaaggaactaagcacatactacaaagctgttgtttcaggtggcacatgc
agcgctgacacatcaacatcaaatgtaaaggcagtacatcagcttgtcctgagggacttc
tatagcgaaactgaccccaaaccagtgtgtcatttctgtaacatcaggaagttgcggttg
accctccagaattccaggttcatggtggccaacaaatcagccacggtaacgaggagacca
aatgtggaaatgaagaggactgccacacctgttaaagccaaggccaaagctcaggccaaa
cccatgtcaaaaaagagtgagagtgttttttctgacgaagatgagtctgatggatatgat
gaggctgaggataaagattctgatgaggatgaaaccagccaaagaaaggatgccgatgat
aaagagggcagtccaggaaaagatggtgaggatgaagaggacagcccaaagaaggatgtt
gataaaagtgaagaggaggaggaggagactaaggaattttccaagtcaagtattgtgtca
gactcacagtcatatgtaacacctgagcaggtaaggaatgctctacgaaaggtctggctc
caagacagcgagttattgaagcacctgtttcccattctggccacttcagagttgaaatac
cccacagacatgttcttcattcacacactgctcgtgatacctccaaaataccgcccttgt
gacttccaaaatggcatgacagtggagcatgagacaagcactctcctgaagaatgttgtg
aagctgtcaaaatgcctcactttcctcatatctctagtgaacgggaccattgaagaactc
cctgacactctcaactacattatctccgagattcctggaaagaatcccttagagaagagt
cagacagtttggttccaaatgcagggaagcgtagacaacatctttgatgccgatctcaat
cgcatggtcaaggttacgaccaaggggattagacaggtgattgagaaaaagaatggcctc
ttccgacggaacctgatgggcaagcgagtcaattactcggcaagatccgtggcggcccct
gatcccctccttgctgtggacgaagtgggtgtgcccatggactttgccatccgactctct
taccctgtgccagtgacgcagtggaatgtggaggaattgaggcagttggtgataaatgga
ccagaagtgtacccaggagccgtaatggttgaggatgaagagggcagaaagaagcgtctt
ggtacattagataagaaccagcgtattgccatagctaagcagttgctcactccaacagag
tcacatgtgaggaaagtaaatgctgccaaaattgtctacaggcatttgcaaaatggtgat
ttagttctaatgaaccgtcagccaactttacataggccaagtatacaagctcacagatca
agaattatgccaaaagaccgtgtgttgcgcatgccttatgccaattgcaaggcctacaat
gctgattttgatggagatgaactcaacatgcacttcccccaaaatgagctggcacgcagt
gaggctcaccacctcatcacaaccaagaaccagtacctcactcccaaggacggctctcca
ctggcaggtctcatccaggattgtgttgtgtcaagtgtcatgcttaccatgcgagggaca
ttcttctgcaaggaggactaccagcagttgctctactcagcactctctgaagagaccagg
aagattgagattctccctccatctgttttgaagccaaagatgctgtggtctggaaagcag
gtcatctccagcctcctttataacatcatcccaaagacaaaggccagaccttctttcaac
tttaagacttcagttaaagtagatttgtggcagacatgtgaatccagaaagtggaaggca
ggtggagatccagagaaaagaaaggagtccatgacagaatcagactttgtcatgcgagat
ggagagctcctgtcaggcgtgattgacaagagtgccataggatctaccagccatggcttg
gtccacatttgctatgatctatatggagggtcagttgcatcgagagtattgactgccatc
aacagactgtgtgtgtactacctacagtggtcagggcacaccattagtgtaaaggagttt
gtcacaccaaaaactctcagcaagaaacgtagggaaagtctagcagacttggtcaagaag
gcccacagcaaagtaagtcagaggctaaatgtcccagaagaggaatttagggattacttt
gaaagttcacacatgtctgggaatgacaaggaaatggctgccattgatgcagcgtacaca
gctgttcttggccccaccacctcggagatcacagcggaaaacgagaaaggactgctccgt
tgcagcttagacaaccacatgcgaatgatggtggacactggtgcaaagggttcaaaggtt
aacatgaatcagatggcttcactctttggatctgtggctattgacggcaagagaatgccc
atcagcataacagggaaattcttgccatcgttcaaaccttatgaagccaatccacgtgct
ggaggttatatcccccatcgcttcatgacaggcatggatcctcaggcatatttctacttg
tgcattgtaggccgtgatagtttacaacatacagctgtaaagacagcaaacagtggttat
ttacaacggtgtcttatcaagcatttggaagggatacaggtcaaatatgacatgacagtg
agaaacagtgatgggcttgtacttcagtttaattatggagaagatggacaggatgtgaca
aaggttcccttcctgaaaaatactgacaccatggatgtgttggtaaacaattacagcagg
ctgttggaagaccgctcactgaacattgctaagtctgttggggataaggaggaagtggac
cactacaccaagaagctaaagaaatgggtaaagaagtatggccaggctggcagtggtcgg
cgttctgggttcctcaagttctgcaagaagatgtcaaagacaattgaagccactggatac
tgcaagaagacaggccgtcctgattcctataaagttctgaaggaaatatgggctgaattg
ccagaagaggaaagaacaaaatatgagaaaatcagttctaagtgtccagacccagtgaat
tcagtattttctggtgcggccaacctgggcgttgtatcagaagcattggaacaacttatt
gatgactactatgaggagaattatgcaaagaaacctgtgcgtgagcagaagctaacgtat
gagcaggtggcaacaacagtccacatgaaggccttgacgtccaaagttgatcctggtgag
gcagttggggcgctgtgtgctcaggccattggtgaaccactgactcagatgacgctcaac
actttccattttgccggaagggatgagcttaacgttaccctcggtgttcctcggatggtg
gagatcttgcgaactgcaggaaaaaacatctcaacacccatcatggaagtgcctttccat
aaaggtatcagcaaggcctatgcaatggctctgcagattaagctcaatgaagtcccatta
gctaaagttctgcacggtctggatgtcagcgtacaattgaaaagggatggaaagaacagg
atccatcgctctacaaaagtgaagttcaccttcctgccacacaagcagtacaaacacgtg
tgcgccgtgaacccatcccgagtgttgcagtacatggagcgtcagtttattgataagata
ctgctgcgagaaattcaaaggtcatttggaaaaaaagtatctgcttgtgcaacagccaca
gatcaaaaaggaggcagtaaaaataggcatgcggaaagtgacaacgatgatgttgatgaa
gacgaggataccctcaaggaaatgaaagaggcagagaataggaaagaagccgcagcagaa
agctcaggcgacgaagaagaagacgagcctgaggccggcgtggaagatggtacactggcc
tcgcgcaccgtgaaagcaaatgagcaagactactcggacggcgaagacgatgaggaaggg
ttgaccaacgagggagacaacgagaaggagctgtcagaggatgaagggctcgggaaggaa
gaagacgttgaggaagatccagggccagcaatagctaaaactcccaagaggaaaaagggc
tccaacatcagtcaagaagtggtactcaagagaaagaatggcgtcatagcaaaagactca
tggatagttgactacagcttcgacacagaggaggaactgtggtgtgaggtcacccttctt
ttacctttgtctggtggtaattacgatatcccatccattgtgcggcaaagatcccaacgc
agtctcattcactacgttcccggaatcaaacgtgtttttgtagtagagaaagatgatggt
ttattgttgagaactgaaggagttaatgtttttacaatgtttgaatatgagcatctcttg
gatgtgaatcggctctacaccaacaacattcaccaggtggctcagatgtacggaatagaa
gctgcacagcgctccattataagggagttgcgtgctgtacaatccgcttatgatatcaag
gttgacttccggcacttaactctactggccgactactttacctgtgagggtgtctacaag
gcctgttcccgccaggctctggctacttgtctctctcctctgcagaagatgtcttatgaa
acatgtacacagttcctcaaatcagctctcttacaaggagagaaagacagaatgctgtca
ccatcagcaaacattgcagttgggcaaccagttaaagtaggcacaaatgtaatgcacgtc
ctgcctgtcattaagttgtga
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integrated database retrieval system
