Penaeus japonicus (kuruma prawn): 122248555
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Entry
122248555 CDS
T07703
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122248555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pja03400
]
122248555
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122248555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
122248555
NCBI-ProteinID:
XP_042864582
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MANVQPKEQLVLDGAHEQGFLAFYKGLPEKPNTTVRLFDRGEYYTVHGQDAVLAARELFR
TNSVIKHLGGGSNKLESVVLSRLNFESFVRDLLLLKHYRVELYKLKSFAKNDWEAEYKAS
PGNLAQFEEILFGANNELTVTTGVIAVKLASEGGHRVVGVGYIDANGRQMSVAEFNDNDT
FSNLEALVVQLSPRECLIPSGDLGPDGAKLKQVLSRSQLLVTERKRNEFSNKDASQDLSR
LLRTKGDASAVAARPEMDRVNAICALAAVIKYLELLGDDSNFAQYTLSMYDLSQYMRLDS
AAVRALHVEPISGSVESSGGVSKTHTILGLLDKCRTPLGHRLLAQWLRQPLVDINKIEER
LDLVEAMVTSVEMRHSLGEEHLRRVPDLNRMARKLTRKAATLQDCYRLYQCIERLPYLCE
AIAKYDGPHTASLAAVFTTPLQELISDLAKYQEMIETTVDMEQANQGEYVIKPDFDETLA
ELRETMNGLEKDIQNQLRKAANDLCLEAGKSIKLESNAQLGYYFRVTLKEEKVLRNNRSY
HMIDTNKAGVRFRNNALQDLNEQHMASKEEYVQQQKTVVEEIMNIAVGYVEVVQNLGQVL
ATLDCIFALATAAVSAPIPYVRPKLLEQGAGVMKLQEIRHPCLELQDDVSFIPNDCTFDK
DNGLFHIITGPNMGGKSTFLRSVGAAVLMAQIGSFVACQEAEISIVDSILARVGAGDCQL
KGVSTFMAEMLETATILRSASNKSLIIIDELGRGTSTYDGFGLAWAISEYIAKEIAAFCL
FATHFHELTALADEVDSVQNYHVTATTAHGALTLLYQVKPGPCDRSFGIHVAELANFPSS
VIEYAKRKAGELEDDFGDEDDSEETVKKRKLEKQEGEKLIEEFLSKASSLDIDNMNEQDL
ETEIKRLRDEVNGKNNAYVARLLSRET
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgtccagccgaaggagcagctcgtcctagatggcgcccacgagcaaggattc
ctcgccttttataagggtcttccggagaaaccaaacaccaccgtccgactgttcgaccgc
ggggagtactacacggtccacggccaggatgcagtgctggccgcgcgggaactcttccgc
actaattccgtcatcaagcatcttggcgggggaagtaacaaattggagtcggtggttttg
agtcgcctgaattttgaatcctttgtgcgggatctactcctgttgaagcattatcgagtg
gagctctataagctgaagtcctttgcaaagaatgactgggaggcagaatacaaggcatct
cctggaaatcttgctcagtttgaggagattctgtttggtgcaaataatgaactcacagtc
acaacaggtgtcattgctgtcaaactagcaagtgaaggcggccatagggttgtgggtgtt
ggctacattgatgcgaacggacgccagatgagtgttgcagagttcaatgacaatgataca
ttcagcaacctggaagcccttgtggtacagctaagcccccgtgaatgtcttatcccctct
ggtgatctggggcctgatggtgccaagctgaaacaggtgttatctcgcagtcaactcctt
gttactgaaagaaagaggaatgaattctcaaacaaggacgcaagtcaggacctgagtcgg
ctcctgcgcacaaagggagatgcatctgctgtagctgcaaggccagagatggaccgcgtt
aatgctatatgcgctctagcagctgttataaaatatttagagcttctgggtgatgatagc
aactttgcccagtacactctatccatgtatgatctcagccagtacatgcgcctagacagt
gcagcagttagggcactacatgtggagcctatcagtggtagtgtagaatcctctggtgga
gtttccaagactcatactatcctagggctcctggacaagtgtaggacaccacttgggcat
cgtttattggcacagtggcttaggcagcctttagttgacattaataaaattgaagagaga
ttagatttggtagaggccatggttaccagtgtagagatgcgtcacagccttggggaggaa
cacttgcgtcgtgtgcctgacctcaatcgcatggctcgcaagctcactcgaaaggcggcc
actctacaagactgttacagactgtaccagtgcatagagaggctaccatacctgtgtgaa
gcaattgccaaatatgatggaccacacacagcttcactggcagcagttttcacaactcct
ctccaggagctgatttctgatttagcaaagtatcaggagatgatagaaacaacagttgac
atggaacaagccaatcagggagagtatgttatcaagcctgactttgatgagacactagca
gaattgagagaaaccatgaatggcctagaaaaggatatccagaaccagctgagaaaggca
gctaatgacctctgtctagaagcagggaagagtataaagcttgagtccaatgctcagctt
ggttattacttcagagtgacactaaaggaggagaaagtgctacgaaataatcgcagctac
cacatgattgatacaaacaaagctggtgtgaggtttaggaataatgcccttcaggacttg
aatgagcagcacatggcatcaaaggaagagtatgtgcagcagcaaaaaactgtggtagag
gaaattatgaatattgcagttgggtatgtggaagtagtacaaaacttaggacaggtgctt
gctactttggactgcatctttgcccttgcaactgctgcagtgtctgcacccattccctat
gtacgacctaaacttttggaacagggagcaggcgtgatgaaattacaggagattcgtcat
ccttgcctggagcttcaggatgatgtatcatttataccaaatgattgtacttttgacaaa
gataatggattgttccacataatcactggacccaatatgggaggtaaaagcactttcctt
cggtctgtgggtgcggcagtcttaatggctcagattgggtcgtttgttgcttgtcaggaa
gcagaaatctccatagtagacagtattcttgctcgggttggtgctggagattgtcaactt
aagggtgtgtcaacatttatggcagagatgcttgagactgcaactattttaagatcggca
agcaacaaatcattgatcatcattgatgaactgggacgtggtacatcaacgtacgatggc
tttggattagcatgggccatatcagaatacattgccaaggagattgcagcattctgcctc
tttgctactcatttccatgagctcacagccctagcagatgaagtggacagtgttcagaac
tatcatgtgacagccacaactgcacatggtgccctaactctcttgtatcaggtaaaacct
ggcccttgtgatcgtagctttggaatccatgtcgcagagctggccaacttcccctcaagt
gtgatagagtatgccaaaagaaaggctggagaactagaagacgactttggtgatgaggat
gattcagaggaaaccgtcaaaaagaggaaattggagaaacaagaaggggaaaagctaatt
gaggagtttctcagcaaagcttcttcattagatattgataatatgaatgagcaagatctg
gagacggagatcaagagattacgtgacgaagtcaatgggaaaaacaatgcatatgtagcc
cggctattgtcacgcgagacttga
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