Penaeus japonicus (kuruma prawn): 122249047
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Entry
122249047 CDS
T07703
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122249047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122249047
03036 Chromosome and associated proteins [BR:
pja03036
]
122249047
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122249047
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
122249047
Chromatin remodeling factors
BAF complex
122249047
PBAF complex
122249047
GBAF(ncBAF) complex
122249047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
BRK
QLQ
ResIII
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
122249047
NCBI-ProteinID:
XP_042865514
LinkDB
All DBs
Position
Unknown
AA seq
1610 aa
AA seq
DB search
MSAPSPNPGSAASPMGPPQQALSPMPPPQATSPAVGPPQAPSPMGPPQAPSPMGPPVMSP
GPSAPPNQPGPPGAPNTSMPPQGPSPHHPYPQGPQGAQGWQQPPGPYPNSYQPQPQQQQG
PPMGPGAHHPPQGPPSGPPTPGLPPPTSGGPNGPSPSGGSFQQENLNALQKAINTMEDKG
LQNDPRYTDLVNMRAKYGNMGPPPPGSSSSVTAGAPTGPPSGPTYGPPGVVGAEGQRPGL
LNPPQMHQLRAQIMAYRCIARNQPVPTHITSMIHGRRPDQDPTRPPGPPGPPGPPVTPSG
PPSGPPSGPPAGPPSAPTSGPPVSTGPPVPTGPPGPQGPPGLPHGMQYPRHAAPGPMPSV
RPPYNGTDPSQTPPPPPSVMTTQPGPGPIPGTTPRPQGPQPAPGATPVPVVPGKTSRVTP
VTKPSGIDPLVLLQERENRLAVRVAHRIDELSGLPATMAEDLKMKAQIELRALRLLNFQR
QLRAEVVGCNRKDTTLETAINIKAYKRTKRQGLREARITEKLEKQQKLEAERKKRQKHQE
YLNAVLQHGRELKEFHRQNNQKIGKLNKALMMHHMNAEREKQKEQERIEKERLRRLMLED
EEGYRKLIDEKKDKRLAYLLTQTDEFIANLTEMVKAHKEDQRLKHKEERKKAREERRRAR
EVSGVEGEDPQQTRIPVIETATGAIMSGMQAPTAATLEVFLASNPGWEVLPEEDTESSDE
EEEKVVKEAEKKEEKEKEKAPEGETKPDVKKVEDDEYRDVTGEKNYYSIAHTIKETVTEQ
ATIMVNGKLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLIETKKNNGP
YLIIVPLSTISNWALEFDKWAPTVQVVVYKGSPQVRRIVQSQMRATKLNVLLTTYEYIIK
DKAVLSKLRWKYMIIDEGHRMKNHHCKLTQTLNTFYNAPHRLLLTGTPLQNKLPELWALL
NFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE
AQLPDKVEYIIKCEMSGLQHVLYRHMQSKGVLLCAEDKKGSKSNTKALMNTIMQLRKLCN
HPFMFQHIEEAYCNHIGFAGGIVQGPDLYRASGKFELLDRILPKLKATDHRVLLFCQMTQ
LMTIMEDYLMFKGFKYLRLDGMTKSEDRGELLRMFNESREFFLFLLSTRAGGLGLNLQSA
DTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNTVEERILAAARYKLNMDEKV
IQAGMFDQKSTGSDRRQFLQAILSNDTIEEEEEDEAPDDETVNQMIARGEDEFEIFQKLD
TERRVTEEKPRLMAEDELPEWMLKEEDTEEEEEEEPEELGDRRARTKKEVDYSDSLTEKE
WLRAIGAMENDDEEEANGSKSKRGSKGKRRRIDDDDDDPKPKKRGRPAREKPGPKNKRLI
KQLKRLMDIVIKYEDSDGRVLSEPFMKLPSRRELPDYYEVIKRPMDIRKILNKIEEGRYE
DLNDVESDFMLLCRNAQEYNEEASIIYEDSIVMQSVFLNARERIETEADNLPEEEDDDDD
EEEEEEVRPKKGKKSKGDKGRGRKKRVKYADDSDDDDDDDDDDVSKKEVE
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaccaagtccaaacccggggagtgcggcctcccccatgggtcctccgcagcag
gctctgtcccccatgcctcccccacaggccacctcccctgctgtgggccctcctcaagct
ccctcacctatgggacctccccaagccccttcacccatgggacccccagtgatgtctcct
ggacccagtgctcctcccaaccagccaggccctcctggggcacccaacacatccatgcct
ccacagggtcctagtcctcaccacccatacccgcaggggccacagggtgcacaggggtgg
cagcagccaccaggtccctacccaaacagttaccagccacagccacagcagcagcagggg
cctcccatgggtcctggtgctcaccaccctccacagggcccccccagtggccctccaaca
ccaggcttgccccctcctacctctggtggccctaatggaccaagtcccagtggaggaagc
ttccagcaggaaaacctgaacgctctccaaaaggccatcaacaccatggaggacaaggga
cttcagaatgaccccagatacacagacctggtcaacatgcgtgctaagtatggaaatatg
ggtccacctccaccaggtagctctagtagtgtcactgctggtgcacccacaggaccacca
agtggaccaacatatggtcctccaggtgttgtgggggctgaagggcaaaggccaggactt
ctcaaccctcctcagatgcaccaactccgagcacagatcatggcctatcgttgcattgct
cgaaaccagccagtccccactcacattacttccatgattcatgggcgacgtccagatcag
gaccccactcggcctccaggccccccagggccccctggcccacctgtaaccccatctgga
ccaccatctggaccacctagtggtcctccagcaggtcccccatcggctccaacatctgga
ccacctgtgtctacaggacctccagtccccacaggccccccaggaccccagggtccacca
ggactccctcatggcatgcagtatccaagacatgcagcaccaggaccaatgccatcagta
cgcccaccatacaatggcacagatccctcccagacccctcctcctccaccaagtgtaatg
acaacccagccaggacctgggcctataccaggaacaactccaaggccacagggtccacag
cctgctccaggtgctacaccagtgcctgtagttcctggaaagaccagtcgtgtcacacca
gttacaaagcctagtggtattgacccattggtgctattgcaagagagagaaaatagattg
gctgtgcgtgtggctcaccgtattgatgaactaagtggtctcccagcaacaatggcagaa
gacttgaaaatgaaagcacagatagaacttcgtgcattgaggctcctgaacttccagaga
cagttacgagctgaggtggtgggttgcaacaggaaagatacaacattggaaacagccatc
aacatcaaagcttacaagagaaccaagaggcaaggcctaagggaggcccgcatcacagag
aagctggaaaagcaacagaagctggaggcggaacgcaagaagaggcagaagcaccaagag
tacctcaatgctgtgttgcagcatggcagggaactcaaggagttccaccgccagaacaac
cagaagatcggcaagctcaacaaggctctgatgatgcaccacatgaatgccgaaagggaa
aagcagaaggaacaggagcgcatagagaaagaacgtctgcgccgcctcatgctggaggat
gaagaaggttaccgtaagctcattgatgaaaagaaggacaagcgtttggcctacctcctc
acgcagacggatgagttcatagccaacctgacagagatggtcaaagctcacaaggaagat
cagcgtctcaaacacaaagaggagagaaagaaagcgcgtgaagaaaggcgtagagcaaga
gaggtgtccggtgttgaaggggaagaccctcaacagacacgtatcccagttatcgagaca
gctacgggtgcaataatgagtgggatgcaagcaccaacagcggcaaccttggaggtgttc
ttagcctcaaaccccggctgggaagtactgcctgaagaggacacagagtcgtccgatgaa
gaggaggagaaggtagtaaaggaagcagaaaagaaggaagagaaagagaaggagaaggca
cccgagggtgaaaccaagccagatgtcaagaaagtggaggatgatgagtaccgggatgtc
acaggagagaagaactactattccattgcacataccatcaaggagaccgtgacagagcaa
gccactatcatggtcaatggcaaacttaaggaatatcagatcaagggtctggagtggcta
gtatccttgtacaacaataacctgaatggtattcttgctgatgaaatgggtctgggtaag
accattcagaccattggcctaatcacgtacctgattgaaacaaagaaaaacaatgggcca
taccttattattgtccctctctccaccatctccaattgggccttggaatttgacaagtgg
gcccccaccgtgcaggtggttgtgtacaaaggatcaccccaagtgcgccgcatagtccag
agtcagatgagagctacaaagctgaatgtcttgctcactacttatgagtacatcatcaag
gacaaggctgtgctatccaaactccgctggaaatacatgattattgatgaaggtcacaga
atgaaaaaccatcattgtaaactgacacagacactcaacacattttacaatgcaccgcac
cgtctgttgctcactggtacacctctgcaaaataaactgccagaattgtgggctctcctc
aatttcctcctgccatctatcttcaagtcatgctccacctttgagcagtggttcaatgct
ccctttgccacgactggtgagaaggtggaactgaatgaagaagaaaccattttgattatt
cgtcgtctgcacaaggtccttaggccattcttgcttaggagattaaagaaggaggtcgaa
gcacagctgcctgacaaggttgaatacatcatcaaatgcgagatgtcagggctacaacat
gtgctctacagacacatgcagtcgaagggtgtcttgttgtgcgcagaggataagaagggt
agcaagagcaacaccaaggcactcatgaacactatcatgcagctacgtaaattgtgtaac
caccccttcatgttccagcacattgaagaagcttattgtaatcatattggttttgctggt
ggcattgtgcagggacctgatctgtaccgagcatctggcaagtttgaactccttgaccgt
attttgcccaaactgaaagccactgatcatcgtgtactcctcttctgtcagatgacacag
ctcatgacaatcatggaggactacctcatgttcaagggattcaagtacctgcgactcgat
ggtatgaccaagtcggaagatcgaggagaacttttgagaatgttcaatgagtctcgggag
ttcttcctcttcttgctctccactcgagctggtggtctgggtctcaacctccagtctgct
gacactgtaatcattttcgactctgactggaatcctcatcaggatctccaggctcaggat
cgagcccatcgtatcggtcagaagaacgaggtgcgagttttaagattgatgactgtgaac
actgtggaggaacgtatcttggctgctgcccgatacaaactgaacatggatgagaaggtc
atccaggctggtatgttcgatcaaaaatctacggggtcagatcgtcggcagttcctccaa
gccatactctcaaatgacaccatagaagaagaggaggaagatgaagccccagatgatgag
acggtgaaccagatgattgctcgtggcgaagatgagtttgagatcttccagaagttggat
accgaaaggagggtgacagaagagaagcctcgcctcatggctgaagatgagctgcctgaa
tggatgttgaaggaggaagatacggaagaagaggaagaggaagaaccagaggagctggga
gaccgccgagctcgaaccaaaaaggaggtggattattctgatagcctgacggagaaggag
tggttgcgagctattggggcaatggaaaatgatgatgaagaggaggccaatgggagcaag
agcaagcgaggctctaaaggcaagcgcagaaggatcgatgacgatgatgatgatccaaag
ccaaagaaaaggggtcgtcctgcgagggagaaaccaggccccaagaacaagcgcctgatc
aagcagctgaagcgcctcatggacatagtcatcaaatatgaagacagtgacggaagagta
ctgagcgaacccttcatgaagctgccctcacgccgagagttgccagactactacgaagtg
atcaaaaggcccatggacatccgcaagatactcaacaagatagaggaaggaaggtatgaa
gacttgaatgacgtggagagcgatttcatgcttctgtgccgcaatgcccaggaatataac
gaagaagcgtcaatcatttatgaagactccatagtcatgcagagcgtgttcctcaatgcc
cgtgaacgcattgagacggaggctgataacctcccagaagaagaagatgatgacgatgat
gaggaagaggaggaggaagtaaggcccaagaagggaaagaaaagcaaaggagacaagggg
agaggacgaaagaaaagagtgaaatatgccgatgattcagatgatgatgatgatgatgat
gacgatgacgtgagtaagaaggaagtagagtga
DBGET
integrated database retrieval system
