Penaeus japonicus (kuruma prawn): 122249319
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Entry
122249319 CDS
T07703
Name
(RefSeq) regulator of nonsense transcripts 3A-like
KO
K14328
regulator of nonsense transcripts 3
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03013
Nucleocytoplasmic transport
pja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122249319
03015 mRNA surveillance pathway
122249319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122249319
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122249319
mRNA cycle factors
P-body specific factors
122249319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
122249319
NCBI-ProteinID:
XP_042866012
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MTVKTSDGTRKEGYKSQGEGSSKRTSEKPHNRGKREKNVPHTKVVARRLPPSMTEEEFLE
AVSPLAEYDYFIFVPADRSLGSYAFSRAYINFKNTDDVFTFRDRFDSYVFVDKKGNEYPA
MVEYAPFQKIPKRIGNKKKDIRAGTIDQDPDFMAFLESLEKPETVQLPTLEVVLEEIQAH
ERELKANNGIIKVKTPLLEFIEQKKAEKLRTKEERREERRRKEFERKKAREDDKKKRKDF
RDHREMKKEEVREVKEDGSVKVREVLRPERGKESYAAEARQEKTRQERDRERFEREKEKQ
RRRDEERQKQREREKERREKEKQIRKEREREERMRRLEEKTKLKEEDRGRYREDAREETG
EDKKGWKRREEAREDAQMEERTQSGKYEGAKSKRYSEGRRKEEREREKRMKEEKRRTEKE
AKVGEVEEEGNERQEERGGGGGGTKVKEKEIVTIKPKETSPPNQGEMREEEKPPVKYSQR
EGEAEKEGAPKEEFRPEEKIRKRREKDPRAERRIRNKDRPTMALYRPGQTRLSASRAKQD
RAEADDTSSSSPSPVMPSGGGETKETSRKSSEPMKDDPPGSSSPSPPSPPPKSEDSGPTE
SKATEEVPETAIKWKQSSVPEERSPEAKRETTDDIKVRDGAEHMEPQEGDVGGERGTEAA
NEGRKYPGVKTMTFRRSVSRE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgaaaacgagtgacgggacgagaaaggaaggctacaaaagccagggagaaggt
tcatccaagagaacatcagaaaagccacataacagagggaagagagagaaaaacgtccct
cacaccaaggtggtggcacgtcgactgcccccatctatgacagaggaagaatttttggaa
gctgtgtcgccactcgcagaatacgactatttcatcttcgtccctgccgacaggagtctt
gggtcttatgctttctctcgagcttatattaattttaagaatacagacgatgttttcacc
tttcgagacaggttcgacagttatgtctttgtcgataagaaaggcaatgaatacccagcc
atggtggaatacgccccattccagaaaattcccaaaagaatcggcaacaaaaaaaaggac
atacgcgcagggaccatagaccaggatccagactttatggcattcctggaatcactagag
aagccagagacggtccagcttccaacacttgaggttgttctggaagagatccaagcccac
gaacgggagctgaaagccaacaatggaatcataaaggtgaaaaccccattacttgaattc
attgaacagaaaaaggcggagaaattgcgaacgaaagaggagaggcgagaggaaaggagg
aggaaggaatttgagaggaagaaagctcgagaggatgacaagaagaagaggaaggacttc
cgagaccacagagagatgaagaaagaagaagtgagagaggtaaaagaggacggctctgtg
aaagtgagagaggtcttgcggcccgagagagggaaagaatcctatgctgccgaagcgaga
caagaaaagacgagacaagagagggacagagagcggttcgagagggagaaggagaaacag
aggaggagagacgaggaaaggcagaagcagagggagagagagaaagaacggagggagaag
gagaaacagataaggaaagaaagagagagagaagaaagaatgagaagacttgaagagaag
acaaagctgaaggaggaagacagaggaaggtacagggaggatgcaagagaggaaacaggg
gaagacaagaagggatggaagagaagagaggaagcaagggaggatgcgcagatggaggag
aggacgcagtcaggcaaatacgaaggcgccaaatccaagcgatacagcgaaggccggcgg
aaggaggagagagagagggaaaagaggatgaaggaggagaagaggaggacagagaaagaa
gcaaaggtgggagaggtcgaggaagaggggaacgagaggcaggaggaaagaggaggcgga
ggaggcggcactaaagtgaaggagaaggaaattgtgacaattaagcccaaggagactagt
cccccaaatcaaggagaaatgagggaggaagagaaaccacccgttaagtacagtcagagg
gaaggagaggcggagaaggagggggcaccaaaggaggagttcagaccagaggagaagata
aggaaaaggagggagaaggacccaagggcagagaggagaatacgcaacaaggacagacca
accatggccctctaccgccctggccagacgaggctgagcgcaagccgggccaagcaagac
cgcgctgaggccgacgacacctcctcctccagccccagtcccgtcatgccttcgggggga
ggagaaacgaaagaaacgagcaggaaatcttccgagcctatgaaggatgacccccctggt
agtagtagccccagcccccccagcccccctcccaaaagcgaggacagtggcccaaccgag
agcaaggccacagaagaagtgccagagacggccataaagtggaagcagagcagtgtgcct
gaagagcgatctcccgaggccaagagggagacgacggacgacatcaaagtccgggacggg
gctgagcacatggagccacaggagggagatgtagggggagagagaggaacagaggctgcc
aatgagggcaggaaatacccaggggtgaaaaccatgaccttccgaaggagtgtgagccga
gagtga
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