Penaeus japonicus (kuruma prawn): 122249857
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Entry
122249857 CDS
T07703
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03030
DNA replication
pja03410
Base excision repair
pja03420
Nucleotide excision repair
pja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122249857
03410 Base excision repair
122249857
03420 Nucleotide excision repair
122249857
03430 Mismatch repair
122249857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pja03032
]
122249857
03036 Chromosome and associated proteins [BR:
pja03036
]
122249857
03400 DNA repair and recombination proteins [BR:
pja03400
]
122249857
DNA replication proteins [BR:
pja03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122249857
DNA Replication Termination Factors
ELG1-RFC complex
122249857
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122249857
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122249857
Check point factors
HRAD17(Rad24)-RFC complex
122249857
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_14
AAA_22
AAA_16
RCF1-5-like_lid
Viral_helicase1
nSTAND_NTPase5
Rad17
Mg_chelatase
nSTAND3
AAA_24
AAA_assoc_2
AAA_11
RuvB_N
AAA_18
AAA_5
AAA_19
ABC_tran
RNA_helicase
NTPase_1
AAA_25
MipZ
AAA_23
AAA_28
MeaB
IstB_IS21
AAA_30
Motif
Other DBs
NCBI-GeneID:
122249857
NCBI-ProteinID:
XP_042866950
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MAGEDAAMEVDNPQDSAGPASTKSSHVPWIEKFRPITFPEIVGNEETVARLEVFAKQGNV
PNIIIAGPPGVGKTTTILCLARAILGPSFKEGVMELNASNDRGIDVVRNKIKMFAQQKVT
LPKGKHKIIILDEADSMTDGAQQALRRTMELYSNTTRFALACNSSEKIIEPIQSRCAMLR
YSKLTDSQVLSKVLEVCRKEDLSHTEDGLEAIVFTAQGDMRQALNNLQSTAQGFNHVSAE
NVFKVCDEPHPLLIKDMIQHCVKTNFDDAYKVLNHLWKMGYAAEDIISNIFRVCKNTTMA
EYLKLEFIKEIGYTHLRIVQGTSSLLQLSGLLARLCAKSLQPAAV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgaagacgcggcgatggaggtggacaatccgcaagattccgccggacctgcg
agcaccaagagctcgcacgtcccctggattgaaaaatttcggccaattaccttcccagaa
attgttggaaatgaggaaaccgtggcacgactggaggtgtttgctaagcagggaaatgtt
cctaacatcatcattgccggtccaccaggagttggcaagaccaccacgatcctatgcctt
gcaagggccatccttgggcctagcttcaaggaaggagtgatggagctaaatgcctcaaat
gaccgaggcattgacgtggtgcgaaataagattaaaatgtttgcacaacagaaagtgact
ctgccaaagggaaaacacaagattattatccttgatgaggcagatagcatgacagatggt
gcccaacaagcacttcggagaaccatggagctttattcaaataccacacgttttgcctta
gcatgtaattcctcagaaaagattattgagccaatacaatctagatgtgctatgctgaga
tactcgaaactaacagactcgcaggttctgtcaaaagttttggaagtttgccggaaggaa
gacctaagtcacactgaagatggtttagaggccattgttttcacagcacaaggagacatg
agacaggcactaaataatttgcagtctacagcccaagggttcaaccatgtctctgctgaa
aatgtgtttaaggtgtgtgatgagccacatcctttactgatcaaggacatgatccagcat
tgtgtcaaaaccaactttgatgatgcttataaggttctaaatcatctgtggaagatgggt
tatgctgcagaagatataattagtaatatatttcgtgtttgtaaaaataccaccatggct
gagtacctgaaattagaatttataaaggaaattggttacactcacctccgtatcgtccaa
ggaacctcgtctctccttcagctctctggacttcttgccagactgtgtgccaaatccctt
caaccggctgctgtgtag
DBGET
integrated database retrieval system
