Penaeus japonicus (kuruma prawn): 122250330
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Entry
122250330 CDS
T07703
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122250330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122250330
03036 Chromosome and associated proteins [BR:
pja03036
]
122250330
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122250330
Coactivators
SAGA/TFTC/STAGA complex
122250330
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122250330
STAGA complex
122250330
TFTC complex
122250330
SAGA complex
122250330
SLIK complex
122250330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
TFIID_NTD2
WDR55
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
WD_LRWD1
RMC1_N
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
122250330
NCBI-ProteinID:
XP_042867635
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MRKVRTEKVMAHVSDYMKRRNLESGGPGGSVTLTEQQVGILGLVSPSAPNTFTFSTTSTQ
HTHVDHQYVRLKSWMMEASEPCRSELSQVLFPLFVHLYLELVAATGRQAANKFFKKHYQV
FLVNRDYENTLSQVVSASSTNSSGDMNSSPVIQNLKSGKYLVRLSELTLNYFLRYLKSSE
NPTLLQIFNTYIEVEVDESGAGSSGAVFRGPDLNTSSSTALVNGHTPDSLSSDASAYAAD
GMDCSPDELRKVKDIMARVRSAQPTAPSLCVYTVSNAYNGLSCANVNAEGQLLACGFEDS
VIKMWKLTPPLHDIGFGKKKTVVGPRGGISHTLLACDDSRIEDSGERDDEEKEEEATPTE
IRNGGRRRNRGGELFALRGHSGPVLDTAFSHDSNYLLSVSEDCSMRLWDLENGNAVALYR
GHSYPVWCVDVAPLTMYVATGSYDTTGRLWSTDATYPLRTLSGHTRAVDCVAFHPNGTYL
ATGSCDRSIRLWQVTDGDAARILLHHKSAINTVSFSPNGKYLASGSEDGTVAVWDLAGGR
VMTEISSSNQVNSGNTGSGTPHQDSIMNVCWSTDSSLLVSASSDGCVRTSHLKQAPASND
GTNSWELNEVGQVLCSGSTNGGSGNNGASGVLLHTSLTSHNYLTSVVALDVERELACGLR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagtgaggacagagaaagtgatggctcatgtcagcgactacatgaagaggaga
aatctcgagagtggagggcccggaggaagtgtgacactaacggagcaacaagtgggaata
ttggggctggtttccccctcggcccccaacaccttcaccttctccaccacctccacccaa
cacacgcatgttgatcaccagtatgtcagactaaaatcctggatgatggaggccagcgag
ccatgccgatcagaactgtcacaagttctgtttccgctcttcgtccacttgtacctggag
ctagtggcagccacaggaagacaggcggccaacaagttcttcaagaaacattatcaggtg
ttcttggtgaaccgtgattatgaaaatacactatctcaggttgtaagtgcatcttctaca
aattcttctggagacatgaactcctctcccgttatacagaatctcaagagtggcaagtac
ctggtacgtttaagtgaactgactttaaactactttctacgatatctgaagtcgagtgag
aatcccacactattacagatattcaacacatacattgaggttgaggtggatgagtcaggt
gctgggagttcaggagctgtgttcagaggacctgatttgaacacatcttcctcaacagca
ttagttaatggtcacactccagactcactgtcctccgatgcctccgcctatgcagcagat
ggaatggattgcagcccagatgaactacgcaaagtgaaagacatcatggctcgtgttcgg
tcggcccaacccactgcaccttcattgtgtgtgtatacggtctcaaatgcatataatggc
ctcagttgtgctaatgtgaatgctgaaggacagcttttagcctgtggctttgaagacagt
gtaatcaaaatgtggaaattgacaccacctctgcatgatatagggtttggtaagaaaaag
acagtagttggacccagaggtgggatatcacacacattacttgcatgtgatgattctcgt
atcgaagatagtggtgaaagagatgacgaagagaaggaagaagaagcaacgcctactgaa
atccgcaatggaggaaggagaagaaatcgtggtggggagctttttgctctacgtggacac
agtggccctgtgctggacacggcattcagtcacgattcaaattacttgctatccgttagt
gaagactgctccatgagactttgggacttagaaaatggtaatgcagtggctctttataga
ggtcattcctatcctgtgtggtgtgtggatgtagcccctctcactatgtatgttgcaaca
ggttcttatgatacgactggaagattgtggtccacagatgcaacgtaccccttacgcacc
ctgtcaggtcacacaagggccgtagattgcgtggctttccatcccaatggcacctactta
gctactggatcctgcgatcgcagtattagactctggcaagtcaccgatggcgatgcagca
cggatcctcctgcaccacaagtcagccatcaacacggtctcattttctccaaacggaaag
tacctggcctctgggagcgaagacggcacagtcgctgtctgggaccttgctggtgggcgt
gtcatgacagaaattagcagtagtaatcaagtcaacagtgggaacactggctcaggtaca
cctcaccaagactcgatcatgaatgtgtgttggtctactgattcgtccctccttgtgtcc
gcttccagcgatggctgcgtgcggactagtcaccttaagcaagctccagcaagcaatgat
ggaaccaattcctgggaactgaacgaagttggccaggtcctgtgcagtggaagtacaaat
ggaggaagtggcaataatggagcgtcaggagtcctgctccacacgtctctaacgtctcat
aattacctcacttctgttgttgctcttgacgtggagagagagctggcctgtgggctacgg
tga
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