Penaeus japonicus (kuruma prawn): 122251383
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Entry
122251383 CDS
T07703
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122251383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122251383
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122251383
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122251383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
122251383
NCBI-ProteinID:
XP_042869230
LinkDB
All DBs
Position
Unknown
AA seq
193 aa
AA seq
DB search
MKEGNGHIVTLPGQRICEATSSHVAGDGTYLFNKYIYASQAGRVIVEPRAGLQVVKVSLG
LQGTVMPEVGSIVTCRVLTVNPNQASVSILCVGFHLLHTPVSGTVRKQNVRDHQIDLVEM
YNSFRPNDIILATVLSLGDVRNYELSTAGTELGVVTAYCEEGHPLVPASWTRMKCKCRSE
MRKVAKVVPPRNN
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagggaaacggacacattgtaactcttcctggccagagaatatgtgaggcaacg
agcagtcatgtggctggggatggaacttatctgttcaacaagtacatctacgcttcccag
gccgggagagtgattgtggaaccaagagcgggcctgcaggtggtgaaggtatctttgggt
ctccaagggacagtaatgccagaggttggaagcattgtcacctgccgcgtcctcacagtg
aacccaaaccaggcctctgtatccattctgtgtgtaggatttcatctactgcacacaccg
gtgtcaggaacggtcaggaaacagaatgtccgcgatcatcaaatagatttggtggagatg
tacaactcttttcgacccaatgacatcatcctggcaaccgtgctctcccttggtgatgta
aggaactatgaactgtcaacagctggcacagaattaggggttgtcacagcctattgcgag
gagggacatcctctcgttccagcctcgtggacgcggatgaagtgtaagtgtcgttctgag
atgagaaaagtggctaaagttgtcccgccaagaaataattaa
DBGET
integrated database retrieval system
